PTI_19G00120.1

Description : Peptidase S54, rhomboid domain [Interproscan].

Gene families : OG_01_0000723 (OrthoFinder) Phylogenetic Tree(s): OG0000723_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: PTI_19G00120.1
Cluster	HCCA: Cluster_25

Target	Alias	Description	ECC score	Gene Family Method	Actions
OT_07G03920.1	No alias	Peptidase S54, rhomboid domain; Ubiquitin-associated...	0.03	OrthoFinder
Transcript_contig_57250	57250	Peptidase S54, rhomboid domain [Interproscan].	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004252	serine-type endopeptidase activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008236	serine-type peptidase activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0017171	serine hydrolase activity	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006812	cation transport	IEP	Enrichment
BP	GO:0006813	potassium ion transport	IEP	Enrichment
MF	GO:0008324	cation transmembrane transporter activity	IEP	Enrichment
MF	GO:0010181	FMN binding	IEP	Enrichment
MF	GO:0015298	solute:cation antiporter activity	IEP	Enrichment
MF	GO:0015299	solute:proton antiporter activity	IEP	Enrichment
BP	GO:0034660	ncRNA metabolic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR022764	Peptidase_S54_rhomboid_dom	270	437

External Links

No external refs found!