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  5. PTI_18G01480.1

PTI_18G01480.1


Description : Helicase-associated [Interproscan].


Gene families : OG_01_0000030 (OrthoFinder) Phylogenetic Tree(s): OG0000030_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_18G01480.1
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
Sro2089_g313960.1 Contig3733.g28633 Helicase 0.02 OrthoFinder
Sro307_g113450.1 Contig2839.g22815 Helicase 0.03 OrthoFinder
TP01G07410.1 No alias Hypothetical protein 0.02 OrthoFinder
Transcript_contig_54935 54935 Helicase-associated [Interproscan]. 0.01 OrthoFinder
Transcript_contig_880 880 Hypothetical protein 0.01 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45545.1_1476 PRW45545 DEAD DEAH box helicase 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003995 acyl-CoA dehydrogenase activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006635 fatty acid beta-oxidation IEP Enrichment
CC GO:0008303 caspase complex IEP Enrichment
BP GO:0009062 fatty acid catabolic process IEP Enrichment
BP GO:0010024 phytochromobilin biosynthetic process IEP Enrichment
BP GO:0016042 lipid catabolic process IEP Enrichment
BP GO:0016054 organic acid catabolic process IEP Enrichment
BP GO:0016255 attachment of GPI anchor to protein IEP Enrichment
MF GO:0016597 amino acid binding IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Enrichment
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Enrichment
BP GO:0019395 fatty acid oxidation IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
BP GO:0030258 lipid modification IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
BP GO:0033539 fatty acid beta-oxidation using acyl-CoA dehydrogenase IEP Enrichment
BP GO:0034440 lipid oxidation IEP Enrichment
CC GO:0042765 GPI-anchor transamidase complex IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044242 cellular lipid catabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0044282 small molecule catabolic process IEP Enrichment
BP GO:0046395 carboxylic acid catabolic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
MF GO:0050897 cobalt ion binding IEP Enrichment
BP GO:0051202 phytochromobilin metabolic process IEP Enrichment
BP GO:0072329 monocarboxylic acid catabolic process IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR005114 Helicase_assoc 334 401
IPR005114 Helicase_assoc 260 328
No external refs found!