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  5. PTI_12G02800.1

PTI_12G02800.1


Description : Proteasome component (PCI) domain [Interproscan].


Gene families : OG_01_0004922 (OrthoFinder) Phylogenetic Tree(s): OG0004922_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_12G02800.1
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Dusal.0557s00007.1 33194258 Proteasome component (PCI) domain [Interproscan]. 0.02 OrthoFinder
XM_003061120.1 MicpuC2_19598, 19598 Proteasome component (PCI) domain [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497261.1_990 KAA8497261 COP9 signalosome complex subunit 4 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Enrichment
CC GO:0005685 U1 snRNP IEP Enrichment
BP GO:0006376 mRNA splice site selection IEP Enrichment
BP GO:0006952 defense response IEP Enrichment
MF GO:0015204 urea transmembrane transporter activity IEP Enrichment
BP GO:0015840 urea transport IEP Enrichment
MF GO:0016289 CoA hydrolase activity IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016790 thiolester hydrolase activity IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
BP GO:0019755 one-carbon compound transport IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
BP GO:0022900 electron transport chain IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
BP GO:0031123 RNA 3'-end processing IEP Enrichment
BP GO:0031124 mRNA 3'-end processing IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
CC GO:0042575 DNA polymerase complex IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
MF GO:0042887 amide transmembrane transporter activity IEP Enrichment
BP GO:0043461 proton-transporting ATP synthase complex assembly IEP Enrichment
CC GO:0043625 delta DNA polymerase complex IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
BP GO:0071918 urea transmembrane transport IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
InterPro domains Description Start Stop
IPR000717 PCI_dom 283 369
No external refs found!