1. Home
  2. Species
  3. Phaeodactylum tricornutum
  4. Sequence
  5. PTI_09G04380.1

PTI_09G04380.1


Description : ABC transporter-like [Interproscan].


Gene families : OG_01_0000392 (OrthoFinder) Phylogenetic Tree(s): OG0000392_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_09G04380.1
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Cre04.g222700 30791597 ABC transporter F family member 1 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cre14.g615950 30776520 ABC transporter F family member 3 OS=Arabidopsis thaliana 0.02 OrthoFinder
Dusal.0504s00002.1 33188688 ABC transporter-like; CLASP N-terminal domain [Interproscan]. 0.02 OrthoFinder
EOD12238 No alias Hypothetical protein [Ensembl]. 0.01 OrthoFinder
OT_02G04850.1 No alias ABC transporter-like [Interproscan]. 0.07 OrthoFinder
OT_15G00690.1 No alias Chromo domain; ABC transporter-like [Interproscan]. 0.02 OrthoFinder
Sro1610_g285810.1 Contig4416.g33186 [NU+] prion formation protein 1 0.03 OrthoFinder
Sro4_g003470.1 Contig3815.g29265 EIF-2-alpha kinase activator GCN1 0.04 OrthoFinder
Sro672_g185120.1 Contig919.g9660 [NU+] prion formation protein 1 0.06 OrthoFinder
SymbC1.scaffold793.3 793.3 ABC transporter-like [Interproscan]. 0.01 OrthoFinder
TP05G07430.1 No alias Hypothetical protein 0.04 OrthoFinder
XM_002504129.1 MICPUN_113371, 113371 ABC transporter 0.07 OrthoFinder
XM_003060137.1 MicpuC2_70787, 70787 ABC transporter 0.04 OrthoFinder
lcl|BLLF01000024.1_cds_GFH06140.1_617 HaLaN_00719, GFH06140 ABC transporter-like [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Enrichment
MF GO:0000287 magnesium ion binding IEP Enrichment
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002098 tRNA wobble uridine modification IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003879 ATP phosphoribosyltransferase activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004637 phosphoribosylamine-glycine ligase activity IEP Enrichment
MF GO:0004743 pyruvate kinase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
CC GO:0005741 mitochondrial outer membrane IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006144 purine nucleobase metabolic process IEP Enrichment
BP GO:0006163 purine nucleotide metabolic process IEP Enrichment
BP GO:0006177 GMP biosynthetic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009112 nucleobase metabolic process IEP Enrichment
BP GO:0009113 purine nucleobase biosynthetic process IEP Enrichment
BP GO:0009123 nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009150 purine ribonucleotide metabolic process IEP Enrichment
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009259 ribonucleotide metabolic process IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019693 ribose phosphate metabolic process IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
MF GO:0030955 potassium ion binding IEP Enrichment
MF GO:0031369 translation initiation factor binding IEP Enrichment
MF GO:0031420 alkali metal ion binding IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
CC GO:0031968 organelle outer membrane IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
CC GO:0033588 elongator holoenzyme complex IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0046037 GMP metabolic process IEP Enrichment
BP GO:0046112 nucleobase biosynthetic process IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0072521 purine-containing compound metabolic process IEP Enrichment
BP GO:0072522 purine-containing compound biosynthetic process IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
BP GO:1901135 carbohydrate derivative metabolic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 1890 2131
IPR003439 ABC_transporter-like_ATP-bd 1641 1775
No external refs found!