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  5. PTI_07G02520.1

PTI_07G02520.1


Description : ABC transporter type 1, transmembrane domain; ABC transporter-like [Interproscan].


Gene families : OG_01_0000036 (OrthoFinder) Phylogenetic Tree(s): OG0000036_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_07G02520.1
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000572.5 tig00000572_g2208.t1 Solute transport.primary active transport.ABC... 0.02 OrthoFinder
Cpa|evm.model.tig00000741.4 tig00000741_g3824.t1 ABC transporter B family member 21 OS=Arabidopsis thaliana 0.03 OrthoFinder
EOD31962 No alias Putative ABC transporter [Ensembl]. 0.03 OrthoFinder
EOD31963 No alias Putative ABC transporter [Ensembl]. 0.04 OrthoFinder
Sro84_g044670.1 Contig220.g2600 Leptomycin B resistance protein pmd1 0.02 OrthoFinder
SymbC1.scaffold2069.6 2069.6 ABC transporter-like; PFTB repeat; Methyltransferase... 0.02 OrthoFinder
TP01G02080.1 No alias ABC transporter-like; ABC transporter type 1,... 0.02 OrthoFinder
XM_002505884.1 MICPUN_88240, 88240 ATP-binding cassette superfamily 0.02 OrthoFinder
XM_003060400.1 MicpuC2_19395, 19395 ATP-binding cassette superfamily 0.02 OrthoFinder
lcl|BLLF01000605.1_cds_GFH13375.1_7852 HaLaN_09249, GFH13375 ABC transporter type 1, transmembrane domain; ABC... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP Enrichment
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006575 cellular modified amino acid metabolic process IEP Enrichment
BP GO:0006749 glutathione metabolic process IEP Enrichment
BP GO:0006751 glutathione catabolic process IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016840 carbon-nitrogen lyase activity IEP Enrichment
MF GO:0016842 amidine-lyase activity IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
BP GO:0042219 cellular modified amino acid catabolic process IEP Enrichment
BP GO:0043171 peptide catabolic process IEP Enrichment
BP GO:0044273 sulfur compound catabolic process IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
BP GO:0071586 CAAX-box protein processing IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 644 797
IPR011527 ABC1_TM_dom 267 551
No external refs found!