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  5. PTI_04G03010.1

PTI_04G03010.1


Description : Translation initiation factor IF- 2, domain 3; Transcription factor, GTP-binding domain; Translation initiation factor IF-2, N-terminal [Interproscan].


Gene families : OG_01_0000574 (OrthoFinder) Phylogenetic Tree(s): OG0000574_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: PTI_04G03010.1
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000842.11 tig00000842_g4831.t1 Protein biosynthesis.organelle translation... 0.01 OrthoFinder
Cre08.g376800 30773828 Protein biosynthesis.organelle translation... 0.02 OrthoFinder
Dusal.0277s00020.1 33188128 Transcription factor, GTP-binding domain; Translation... 0.01 OrthoFinder
Dusal.1090s00001.1 33196376 Transcription factor, GTP-binding domain; Translation... 0.02 OrthoFinder
Sro81_g043420.1 Contig1318.g12171 Factor IF-2 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
CC GO:0005963 magnesium-dependent protein serine/threonine phosphatase complex IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
CC GO:0008287 protein serine/threonine phosphatase complex IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0019888 protein phosphatase regulator activity IEP Enrichment
CC GO:0030289 protein phosphatase 4 complex IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
CC GO:1903293 phosphatase complex IEP Enrichment
InterPro domains Description Start Stop
IPR000795 T_Tr_GTP-bd_dom 328 484
IPR006847 IF2_N 238 285
IPR023115 TIF_IF2_dom3 620 720
No external refs found!