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  5. PTI_01G07410.1

PTI_01G07410.1


Description : Transcription initiation factor TFIID subunit 1, domain of unknown function; Bromodomain [Interproscan].


Gene families : OG_01_0003440 (OrthoFinder) Phylogenetic Tree(s): OG0003440_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_01G07410.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020903.20 tig00020903_g15088.t1 RNA biosynthesis.RNA polymerase II-dependent... 0.03 OrthoFinder
Cre10.g425501 30790106 Transcription initiation factor TFIID subunit 1 OS=Oryza... 0.03 OrthoFinder
Cz01g22250.t1 No alias Zinc finger, CW-type; Transcription initiation factor... 0.04 OrthoFinder
Dusal.0232s00002.1 33201486 Transcription initiation factor TFIID subunit 1, domain... 0.01 OrthoFinder
EOD14533 No alias Transcription initiation factor TFIID subunit 1, domain... 0.03 OrthoFinder
Sro1358_g265900.1 Contig914.g9577 Transcription initiation factor TFIID subunit 1 0.02 OrthoFinder
lcl|BLLF01000450.1_cds_GFH11937.1_6414 HaLaN_07531, GFH11937 Hypothetical protein 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8497668.1_6621 KAA8497668 Transcription initiation factor TFIID subunit 1 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0004484 mRNA guanylyltransferase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Enrichment
MF GO:0004651 polynucleotide 5'-phosphatase activity IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
BP GO:0006370 7-methylguanosine mRNA capping IEP Enrichment
MF GO:0008192 RNA guanylyltransferase activity IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0009452 7-methylguanosine RNA capping IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
BP GO:0032012 regulation of ARF protein signal transduction IEP Enrichment
BP GO:0036260 RNA capping IEP Enrichment
BP GO:0046578 regulation of Ras protein signal transduction IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
MF GO:0070568 guanylyltransferase activity IEP Enrichment
CC GO:0071203 WASH complex IEP Enrichment
MF GO:0098518 polynucleotide phosphatase activity IEP Enrichment
BP GO:1902531 regulation of intracellular signal transduction IEP Enrichment
InterPro domains Description Start Stop
IPR022591 TFIID_sub1_DUF3591 502 903
IPR001487 Bromodomain 1257 1335
IPR022591 TFIID_sub1_DUF3591 334 441
No external refs found!