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  5. PTI_01G05420.1

PTI_01G05420.1


Description : Ribosomal protein S17/S11 [Interproscan].


Gene families : OG_01_0001358 (OrthoFinder) Phylogenetic Tree(s): OG0001358_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_01G05420.1
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Cre07.g337800 30774624, MRPS17 No description available 0.02 OrthoFinder
EOD06737 No alias Ribosomal protein S17/S11 [Interproscan]. 0.03 OrthoFinder
Sro174_g076510.1 Contig4298.g32435 Protein S17 0.02 OrthoFinder
TP10G01720.1 No alias Ribosomal protein S17/S11 [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
BP GO:0030490 maturation of SSU-rRNA IEP Enrichment
MF GO:0030515 snoRNA binding IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0030686 90S preribosome IEP Enrichment
CC GO:0030688 preribosome, small subunit precursor IEP Enrichment
CC GO:0030880 RNA polymerase complex IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
InterPro domains Description Start Stop
IPR000266 Ribosomal_S17/S11 94 159
No external refs found!