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  5. OT_15G01640.1

OT_15G01640.1


Description : Vacuolar protein sorting-associated protein 13, second N-terminal domain; Vacuolar protein sorting-associated protein 13, N-terminal domain; Vacuolar protein sorting-associated protein 62 [Interproscan].


Gene families : OG_01_0000454 (OrthoFinder) Phylogenetic Tree(s): OG0000454_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_15G01640.1
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000042.91 tig00000042_g15491.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00000459.51 tig00000459_g1113.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00001343.3 tig00001343_g8327.t1 No description available 0.01 OrthoFinder
Cpa|evm.model.tig00020710.86 tig00020710_g13343.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00020904.70 tig00020904_g15203.t1 No description available 0.01 OrthoFinder
Cpa|evm.model.tig00021428.20 tig00021428_g21163.t1 No description available 0.01 OrthoFinder
Cre12.g483500 30792128 No description available 0.02 OrthoFinder
Cz02g19210.t1 No alias VPS13, repeated coiled region; Vacuolar protein... 0.05 OrthoFinder
Cz14g16120.t1 No alias Vacuolar protein sorting-associated protein 13,... 0.03 OrthoFinder
Dusal.0511s00002.1 33195055 Vacuolar protein sorting-associated protein 13,... 0.01 OrthoFinder
EOD25591 No alias Vacuolar protein sorting-associated protein 13,... 0.01 OrthoFinder
Transcript_contig_53733 53733 Vacuolar protein sorting-associated protein 13,... 0.01 OrthoFinder
XM_002506972.1 MICPUN_54783, 54783 Vacuolar protein sorting-associated protein 13, second... 0.03 OrthoFinder
XM_002507017.1 MICPUN_54877, 54877 Vacuolar protein sorting-associated protein 13, second... 0.03 OrthoFinder
XM_003054760.1 MicpuC2_49875, 49875 Vacuolar protein sorting-associated protein 13, second... 0.02 OrthoFinder
lcl|BLLF01000617.1_cds_GFH13477.1_7954 HaLaN_09370, GFH13477 Vacuolar protein sorting-associated protein 13,... 0.02 OrthoFinder
lcl|BLLF01000617.1_cds_GFH13478.1_7955 HaLaN_09371, GFH13478 Hypothetical protein 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Enrichment
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0004402 histone acetyltransferase activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005887 integral component of plasma membrane IEP Enrichment
BP GO:0005992 trehalose biosynthetic process IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
BP GO:0009306 protein secretion IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
BP GO:0015689 molybdate ion transport IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0030126 COPI vesicle coat IEP Enrichment
CC GO:0031226 intrinsic component of plasma membrane IEP Enrichment
MF GO:0034212 peptide N-acetyltransferase activity IEP Enrichment
MF GO:0035251 UDP-glucosyltransferase activity IEP Enrichment
BP GO:0035592 establishment of protein localization to extracellular region IEP Enrichment
BP GO:0046351 disaccharide biosynthetic process IEP Enrichment
MF GO:0046527 glucosyltransferase activity IEP Enrichment
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
BP GO:0071692 protein localization to extracellular region IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
InterPro domains Description Start Stop
IPR026854 VPS13-like_N 2 119
IPR009291 Vps62 2820 2896
IPR009291 Vps62 2048 2123
IPR009291 Vps62 2238 2297
IPR031646 VPS13_N2 172 412
No external refs found!