OT_11G02060.1

Description : AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core; Peptidase M41 [Interproscan].

Gene families : OG_01_0000075 (OrthoFinder) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: OT_11G02060.1
Cluster	HCCA: Cluster_6

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00021127.121	tig00021127_g18802.t1	ATP-dependent zinc metalloprotease FTSH 5, chloroplastic...	0.02	OrthoFinder
Cpa\|evm.model.tig00021275.24	tig00021275_g19884.t1	ATP-dependent zinc metalloprotease FTSH 7, chloroplastic...	0.05	OrthoFinder
Cre07.g352350	30774541	ATP-dependent zinc metalloprotease FTSH, chloroplastic...	0.08	OrthoFinder
Cre17.g720050	30782442, FHL2	Protein degradation.peptidase families.metallopeptidase...	0.02	OrthoFinder
Cre17.g739752	30782539	Probable inactive ATP-dependent zinc metalloprotease...	0.03	OrthoFinder
Cz05g27050.t1	No alias	AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core;...	0.04	OrthoFinder
Cz10g22210.t1	No alias	AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core;...	0.04	OrthoFinder
Cz13g18040.t1	No alias	AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core;...	0.04	OrthoFinder
Dusal.0274s00008.1	33185615	ATPase, AAA-type, core; Peptidase M41 [Interproscan].	0.04	OrthoFinder
Sro51_chlor_g030730.1	FtsH	FtsH	0.01	OrthoFinder
Transcript_contig_364	364	ATPase, AAA-type, core [Interproscan].	0.02	OrthoFinder
Transcript_contig_54241	54241	Peptidase M41; ATPase, AAA-type, core; AAA ATPase, AAA+...	0.02	OrthoFinder
Transcript_contig_54885	54885	Peptidase M41; ATPase, AAA-type, core; AAA ATPase, AAA+...	0.04	OrthoFinder
Vocar.0004s0172.1	32889955	Peptidase M41; ATPase, AAA-type, core; AAA ATPase, AAA+...	0.02	OrthoFinder
Vocar.0004s0344.1	32889652	ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain...	0.02	OrthoFinder
Vocar.0005s0095.1	32884072	Peptidase M41; ATPase, AAA-type, core; AAA ATPase, AAA+...	0.07	OrthoFinder
Vocar.0016s0146.1	32898067	Peptidase M41; ATPase, AAA-type, core; AAA ATPase, AAA+...	0.02	OrthoFinder
XM_002503449.1	MICPUN_59866, 59866	Peptidase M41; ATPase, AAA-type, core; AAA ATPase, AAA+...	0.13	OrthoFinder
XM_002503935.1	MICPUN_83563, 83563	AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core...	0.1	OrthoFinder
XM_002508006.1	MICPUN_94954, 94954	Peptidase M41; ATPase, AAA-type, core; AAA ATPase, AAA+...	0.04	OrthoFinder
XM_002508974.1	MICPUN_87320, 87320	Peptidase M41; AAA ATPase, AAA+ lid domain; ATPase,...	0.09	OrthoFinder
XM_003054912.1	MicpuC2_61359, 61359	ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;...	0.05	OrthoFinder
XM_003055594.1	MicpuC2_1627, 1627	ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;...	0.02	OrthoFinder
XM_003058612.1	MicpuC2_58438, 58438	ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;...	0.03	OrthoFinder
XM_003061697.1	MicpuC2_28671, 28671	ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;...	0.04	OrthoFinder
lcl\|BLLF01003257.1_cds_GFH26835.1_21312	HaLaN_25053, GFH26835	AAA domain-containing protein	0.04	OrthoFinder
lcl\|LHPG02000001.1_cds_PRW60934.1_745	PRW60934	ATP-dependent zinc metalloprotease chloroplastic isoform C	0.03	OrthoFinder
lcl\|LHPG02000002.1_cds_PRW60287.1_4164	PRW60287	Cell division isoform A	0.03	OrthoFinder
lcl\|LHPG02000010.1_cds_PRW51102.1_1065	PRW51102	ATP-dependent zinc metalloprotease FTSH chloroplastic isoform B	0.03	OrthoFinder
lcl\|LHPG02000018.1_cds_PRW33078.1_3788	PRW33078	ATP-dependent zinc metalloprotease	0.06	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004222	metalloendopeptidase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006508	proteolysis	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008237	metallopeptidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	Enrichment
MF	GO:0002161	aminoacyl-tRNA editing activity	IEP	Enrichment
MF	GO:0003676	nucleic acid binding	IEP	Enrichment
MF	GO:0003723	RNA binding	IEP	Enrichment
MF	GO:0003735	structural constituent of ribosome	IEP	Enrichment
MF	GO:0003743	translation initiation factor activity	IEP	Enrichment
MF	GO:0003746	translation elongation factor activity	IEP	Enrichment
MF	GO:0004055	argininosuccinate synthase activity	IEP	Enrichment
MF	GO:0004425	indole-3-glycerol-phosphate synthase activity	IEP	Enrichment
MF	GO:0004594	pantothenate kinase activity	IEP	Enrichment
MF	GO:0004664	prephenate dehydratase activity	IEP	Enrichment
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Enrichment
MF	GO:0004827	proline-tRNA ligase activity	IEP	Enrichment
MF	GO:0005198	structural molecule activity	IEP	Enrichment
CC	GO:0005575	cellular_component	IEP	Enrichment
CC	GO:0005840	ribosome	IEP	Enrichment
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEP	Enrichment
BP	GO:0006082	organic acid metabolic process	IEP	Enrichment
BP	GO:0006399	tRNA metabolic process	IEP	Enrichment
BP	GO:0006412	translation	IEP	Enrichment
BP	GO:0006413	translational initiation	IEP	Enrichment
BP	GO:0006417	regulation of translation	IEP	Enrichment
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Enrichment
BP	GO:0006433	prolyl-tRNA aminoacylation	IEP	Enrichment
BP	GO:0006448	regulation of translational elongation	IEP	Enrichment
BP	GO:0006449	regulation of translational termination	IEP	Enrichment
BP	GO:0006474	N-terminal protein amino acid acetylation	IEP	Enrichment
BP	GO:0006518	peptide metabolic process	IEP	Enrichment
BP	GO:0006520	cellular amino acid metabolic process	IEP	Enrichment
BP	GO:0006525	arginine metabolic process	IEP	Enrichment
BP	GO:0006526	arginine biosynthetic process	IEP	Enrichment
BP	GO:0006558	L-phenylalanine metabolic process	IEP	Enrichment
BP	GO:0006694	steroid biosynthetic process	IEP	Enrichment
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Enrichment
MF	GO:0008097	5S rRNA binding	IEP	Enrichment
MF	GO:0008135	translation factor activity, RNA binding	IEP	Enrichment
BP	GO:0008202	steroid metabolic process	IEP	Enrichment
BP	GO:0008652	cellular amino acid biosynthetic process	IEP	Enrichment
BP	GO:0009058	biosynthetic process	IEP	Enrichment
BP	GO:0009059	macromolecule biosynthetic process	IEP	Enrichment
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	Enrichment
BP	GO:0009073	aromatic amino acid family biosynthetic process	IEP	Enrichment
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	Enrichment
BP	GO:0009094	L-phenylalanine biosynthetic process	IEP	Enrichment
BP	GO:0009095	aromatic amino acid family biosynthetic process, prephenate pathway	IEP	Enrichment
BP	GO:0009891	positive regulation of biosynthetic process	IEP	Enrichment
BP	GO:0009893	positive regulation of metabolic process	IEP	Enrichment
BP	GO:0009987	cellular process	IEP	Enrichment
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	Enrichment
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	Enrichment
BP	GO:0010608	posttranscriptional regulation of gene expression	IEP	Enrichment
BP	GO:0010628	positive regulation of gene expression	IEP	Enrichment
CC	GO:0015934	large ribosomal subunit	IEP	Enrichment
BP	GO:0015936	coenzyme A metabolic process	IEP	Enrichment
BP	GO:0015937	coenzyme A biosynthetic process	IEP	Enrichment
BP	GO:0016053	organic acid biosynthetic process	IEP	Enrichment
BP	GO:0016070	RNA metabolic process	IEP	Enrichment
BP	GO:0016125	sterol metabolic process	IEP	Enrichment
BP	GO:0016126	sterol biosynthetic process	IEP	Enrichment
MF	GO:0016597	amino acid binding	IEP	Enrichment
MF	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	IEP	Enrichment
MF	GO:0016743	carboxyl- or carbamoyltransferase activity	IEP	Enrichment
MF	GO:0016829	lyase activity	IEP	Enrichment
MF	GO:0016830	carbon-carbon lyase activity	IEP	Enrichment
MF	GO:0016831	carboxy-lyase activity	IEP	Enrichment
MF	GO:0016874	ligase activity	IEP	Enrichment
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Enrichment
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	Enrichment
MF	GO:0016887	ATPase	IEP	Enrichment
BP	GO:0017196	N-terminal peptidyl-methionine acetylation	IEP	Enrichment
BP	GO:0018206	peptidyl-methionine modification	IEP	Enrichment
BP	GO:0019752	carboxylic acid metabolic process	IEP	Enrichment
MF	GO:0019842	vitamin binding	IEP	Enrichment
MF	GO:0019843	rRNA binding	IEP	Enrichment
MF	GO:0030170	pyridoxal phosphate binding	IEP	Enrichment
CC	GO:0031248	protein acetyltransferase complex	IEP	Enrichment
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	Enrichment
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	Enrichment
BP	GO:0031365	N-terminal protein amino acid modification	IEP	Enrichment
MF	GO:0031369	translation initiation factor binding	IEP	Enrichment
CC	GO:0031414	N-terminal protein acetyltransferase complex	IEP	Enrichment
CC	GO:0031417	NatC complex	IEP	Enrichment
BP	GO:0032268	regulation of cellular protein metabolic process	IEP	Enrichment
BP	GO:0032270	positive regulation of cellular protein metabolic process	IEP	Enrichment
MF	GO:0032977	membrane insertase activity	IEP	Enrichment
BP	GO:0033866	nucleoside bisphosphate biosynthetic process	IEP	Enrichment
BP	GO:0034030	ribonucleoside bisphosphate biosynthetic process	IEP	Enrichment
BP	GO:0034033	purine nucleoside bisphosphate biosynthetic process	IEP	Enrichment
BP	GO:0034248	regulation of cellular amide metabolic process	IEP	Enrichment
BP	GO:0034250	positive regulation of cellular amide metabolic process	IEP	Enrichment
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Enrichment
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	Enrichment
BP	GO:0034660	ncRNA metabolic process	IEP	Enrichment
MF	GO:0043021	ribonucleoprotein complex binding	IEP	Enrichment
MF	GO:0043022	ribosome binding	IEP	Enrichment
BP	GO:0043038	amino acid activation	IEP	Enrichment
BP	GO:0043039	tRNA aminoacylation	IEP	Enrichment
BP	GO:0043043	peptide biosynthetic process	IEP	Enrichment
MF	GO:0043177	organic acid binding	IEP	Enrichment
CC	GO:0043226	organelle	IEP	Enrichment
CC	GO:0043228	non-membrane-bounded organelle	IEP	Enrichment
CC	GO:0043229	intracellular organelle	IEP	Enrichment
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	Enrichment
BP	GO:0043243	positive regulation of protein-containing complex disassembly	IEP	Enrichment
BP	GO:0043244	regulation of protein-containing complex disassembly	IEP	Enrichment
BP	GO:0043436	oxoacid metabolic process	IEP	Enrichment
BP	GO:0043603	cellular amide metabolic process	IEP	Enrichment
BP	GO:0043604	amide biosynthetic process	IEP	Enrichment
BP	GO:0044237	cellular metabolic process	IEP	Enrichment
BP	GO:0044249	cellular biosynthetic process	IEP	Enrichment
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Enrichment
BP	GO:0044267	cellular protein metabolic process	IEP	Enrichment
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	Enrichment
BP	GO:0044281	small molecule metabolic process	IEP	Enrichment
BP	GO:0044283	small molecule biosynthetic process	IEP	Enrichment
CC	GO:0044391	ribosomal subunit	IEP	Enrichment
MF	GO:0045182	translation regulator activity	IEP	Enrichment
BP	GO:0045727	positive regulation of translation	IEP	Enrichment
BP	GO:0045901	positive regulation of translational elongation	IEP	Enrichment
BP	GO:0045905	positive regulation of translational termination	IEP	Enrichment
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	Enrichment
BP	GO:0051130	positive regulation of cellular component organization	IEP	Enrichment
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	Enrichment
BP	GO:0051246	regulation of protein metabolic process	IEP	Enrichment
BP	GO:0051247	positive regulation of protein metabolic process	IEP	Enrichment
MF	GO:0070279	vitamin B6 binding	IEP	Enrichment
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	Enrichment
BP	GO:0090304	nucleic acid metabolic process	IEP	Enrichment
CC	GO:0110165	cellular anatomical entity	IEP	Enrichment
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Enrichment
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Enrichment
MF	GO:0140104	molecular carrier activity	IEP	Enrichment
MF	GO:0140597	protein carrier activity	IEP	Enrichment
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Enrichment
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	Enrichment
BP	GO:1901576	organic substance biosynthetic process	IEP	Enrichment
BP	GO:1901605	alpha-amino acid metabolic process	IEP	Enrichment
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	Enrichment
BP	GO:1902221	erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process	IEP	Enrichment
BP	GO:1902223	erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process	IEP	Enrichment
CC	GO:1902493	acetyltransferase complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	249	381
IPR000642	Peptidase_M41	470	584
IPR041569	AAA_lid_3	405	443

External Links

No external refs found!

OT_11G02060.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation