OT_09G00780.1


Description : Phosphoribosylaminoimidazole carboxylase, C-terminal domain; ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type; PurE domain [Interproscan].


Gene families : OG_01_0002800 (OrthoFinder) Phylogenetic Tree(s): OG0002800_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_09G00780.1
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001181.31 tig00001181_g7444.t1 Nucleotide metabolism.purines.ribonucleotide (RN)... 0.02 OrthoFinder
EOD20945 No alias PurE domain; Phosphoribosylaminoimidazole carboxylase,... 0.02 OrthoFinder
Transcript_contig_78032 78032 Phosphoribosylaminoimidazole carboxylase, C-terminal... 0.01 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006189 'de novo' IMP biosynthetic process IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Enrichment
MF GO:0003937 IMP cyclohydrolase activity IEP Enrichment
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
MF GO:0008452 RNA ligase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0019238 cyclohydrolase activity IEP Enrichment
BP GO:0030490 maturation of SSU-rRNA IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0030686 90S preribosome IEP Enrichment
CC GO:0030688 preribosome, small subunit precursor IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
InterPro domains Description Start Stop
IPR003135 ATP-grasp_carboxylate-amine 159 330
IPR040686 PurK_C 357 419
IPR000031 PurE_dom 440 585
No external refs found!