1. Home
  2. Species
  3. Ostreococcus tauri
  4. Sequence
  5. OT_07G01740.1

OT_07G01740.1


Description : ABC-transporter extension domain; ABC transporter-like [Interproscan].


Gene families : OG_01_0000132 (OrthoFinder) Phylogenetic Tree(s): OG0000132_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_07G01740.1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000383.51 tig00000383_g24665.t1 ABC transporter F family member 1 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cpa|evm.model.tig00020629.98 tig00020629_g12419.t1 ABC transporter F family member 3 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cre02.g095200 30785790 ABC transporter F family member 4 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre11.g478128 30775784 ABC transporter F family member 3 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cz03g13130.t1 No alias ABC-transporter extension domain; ABC transporter-like... 0.04 OrthoFinder
Cz07g32170.t1 No alias ABC-transporter extension domain; ABC transporter-like... 0.02 OrthoFinder
EOD04357 No alias ABC transporter protein [Ensembl]. 0.03 OrthoFinder
EOD07705 No alias ABC transporter protein [Ensembl]. 0.01 OrthoFinder
EOD21710 No alias W2 domain; ABC transporter-like; ABC-transporter... 0.03 OrthoFinder
Sro1254_g256400.2 No alias ABC transporter-like [Interproscan]. 0.03 OrthoFinder
Sro365_g127370.1 Contig3612.g27911 Tylosin resistance ATP-binding protein TlrC 0.02 OrthoFinder
Vocar.0027s0024.1 32887256 ABC-transporter extension domain; ABC transporter-like... 0.02 OrthoFinder
XM_002503388.1 MICPUN_83355, 83355 ATP-binding cassette superfamily 0.02 OrthoFinder
XM_003057335.1 MicpuC2_70921, 70921 Zinc finger/ABC transporter fusion protein 0.02 OrthoFinder
XM_003060298.1 MicpuC2_60050, 60050 ABC transporter 0.02 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61109.1_452 PRW61109 ATP-binding cassette 0.04 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56522.1_9654 PRW56522 ABC transporter F family member 4 isoform A 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0004615 phosphomannomutase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009225 nucleotide-sugar metabolic process IEP Enrichment
BP GO:0009226 nucleotide-sugar biosynthetic process IEP Enrichment
BP GO:0009298 GDP-mannose biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0017069 snRNA binding IEP Enrichment
MF GO:0017070 U6 snRNA binding IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0019673 GDP-mannose metabolic process IEP Enrichment
MF GO:0030623 U5 snRNA binding IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
MF GO:0031369 translation initiation factor binding IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 427 648
IPR003439 ABC_transporter-like_ATP-bd 1090 1223
IPR003439 ABC_transporter-like_ATP-bd 775 932
IPR003439 ABC_transporter-like_ATP-bd 113 239
IPR032781 ABC_tran_Xtn 972 1056
No external refs found!