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  5. OT_04G05480.1

OT_04G05480.1


Description : Helicase, C-terminal; SNF2-related, N-terminal domain; C-5 cytosine methyltransferase [Interproscan].


Gene families : OG_01_0002593 (OrthoFinder) Phylogenetic Tree(s): OG0002593_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_04G05480.1
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
EOD10393 No alias C-5 cytosine methyltransferase [Interproscan]. 0.03 OrthoFinder
EOD26311 No alias C-5 cytosine methyltransferase; SNF2-related, N-terminal... 0.03 OrthoFinder
PTI_06G00580.1 No alias C-5 cytosine methyltransferase; SNF2-related, N-terminal... 0.03 OrthoFinder
Sro1246_g255770.1 Contig800.g8974 SNF2 family helicase 0.02 OrthoFinder
Sro2429_g327410.1 Contig1246.g11651 Hypothetical protein 0.02 OrthoFinder
TP03G00950.1 No alias SNF2-related, N-terminal domain; C-5 cytosine... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
BP GO:0016197 endosomal transport IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
BP GO:0016482 cytosolic transport IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0019239 deaminase activity IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
CC GO:0030906 retromer, cargo-selective complex IEP Enrichment
BP GO:0032012 regulation of ARF protein signal transduction IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
MF GO:0035091 phosphatidylinositol binding IEP Enrichment
BP GO:0042147 retrograde transport, endosome to Golgi IEP Enrichment
MF GO:0043138 3'-5' DNA helicase activity IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0046578 regulation of Ras protein signal transduction IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
BP GO:1902531 regulation of intracellular signal transduction IEP Enrichment
InterPro domains Description Start Stop
IPR000330 SNF2_N 1621 1779
IPR001650 Helicase_C 2115 2235
IPR000330 SNF2_N 1227 1372
IPR001525 C5_MeTfrase 196 556
No external refs found!