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  5. OT_04G04210.1

OT_04G04210.1


Description : Zinc finger, RING-type; E3 ubiquitin-protein ligase RNF126-like, zinc-ribbon [Interproscan].


Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_04G04210.1
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000227.13 tig00000227_g19807.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00020934.54 tig00020934_g16122.t1 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder
Cpa|evm.model.tig00020943.22 tig00020943_g16264.t1 Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder
Dusal.0652s00001.1 33198111 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
EOD07947 No alias Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
EOD09224 No alias Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold10993.1 10993.1 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
XM_003060440.1 MicpuC2_60365, 60365 E3 ubiquitin-protein ligase RNF126-like, zinc-ribbon;... 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498945.1_7898 KAA8498945 E3 ubiquitin-protein ligase 0.02 OrthoFinder
lcl|VRMN01000016.1_cds_KAA8491049.1_9806 KAA8491049 E3 ubiquitin-protein ligase 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0004109 coproporphyrinogen oxidase activity IEP Enrichment
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Enrichment
MF GO:0004408 holocytochrome-c synthase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
MF GO:0016846 carbon-sulfur lyase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Enrichment
MF GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEP Enrichment
BP GO:0052646 alditol phosphate metabolic process IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
BP GO:1901136 carbohydrate derivative catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001841 Znf_RING 110 153
IPR039525 RNF126-like_zinc-ribbon 3 38
No external refs found!