OT_04G00210.1


Description : LysM domain [Interproscan].


Gene families : OG_01_0097324 (OrthoFinder) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_04G00210.1
Cluster HCCA: Cluster_58


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0004615 phosphomannomutase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005742 mitochondrial outer membrane translocase complex IEP Enrichment
BP GO:0006166 purine ribonucleoside salvage IEP Enrichment
BP GO:0006190 inosine salvage IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006839 mitochondrial transport IEP Enrichment
BP GO:0006952 defense response IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
MF GO:0008252 nucleotidase activity IEP Enrichment
MF GO:0008253 5'-nucleotidase activity IEP Enrichment
BP GO:0009119 ribonucleoside metabolic process IEP Enrichment
BP GO:0009163 nucleoside biosynthetic process IEP Enrichment
BP GO:0009225 nucleotide-sugar metabolic process IEP Enrichment
BP GO:0009226 nucleotide-sugar biosynthetic process IEP Enrichment
BP GO:0009298 GDP-mannose biosynthetic process IEP Enrichment
BP GO:0009452 7-methylguanosine RNA capping IEP Enrichment
MF GO:0015035 protein-disulfide reductase activity IEP Enrichment
MF GO:0015036 disulfide oxidoreductase activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0017025 TBP-class protein binding IEP Enrichment
BP GO:0019673 GDP-mannose metabolic process IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0030150 protein import into mitochondrial matrix IEP Enrichment
BP GO:0030490 maturation of SSU-rRNA IEP Enrichment
MF GO:0030515 snoRNA binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0031406 carboxylic acid binding IEP Enrichment
MF GO:0031418 L-ascorbic acid binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0036260 RNA capping IEP Enrichment
BP GO:0042278 purine nucleoside metabolic process IEP Enrichment
BP GO:0042451 purine nucleoside biosynthetic process IEP Enrichment
BP GO:0042455 ribonucleoside biosynthetic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043094 cellular metabolic compound salvage IEP Enrichment
BP GO:0043101 purine-containing compound salvage IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043174 nucleoside salvage IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0044743 protein transmembrane import into intracellular organelle IEP Enrichment
BP GO:0046102 inosine metabolic process IEP Enrichment
BP GO:0046103 inosine biosynthetic process IEP Enrichment
BP GO:0046128 purine ribonucleoside metabolic process IEP Enrichment
BP GO:0046129 purine ribonucleoside biosynthetic process IEP Enrichment
MF GO:0048029 monosaccharide binding IEP Enrichment
MF GO:0050483 IMP 5'-nucleotidase activity IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0065002 intracellular protein transmembrane transport IEP Enrichment
BP GO:0070585 protein localization to mitochondrion IEP Enrichment
BP GO:0071806 protein transmembrane transport IEP Enrichment
BP GO:0072655 establishment of protein localization to mitochondrion IEP Enrichment
CC GO:0098799 outer mitochondrial membrane protein complex IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140296 general transcription initiation factor binding IEP Enrichment
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Enrichment
BP GO:1901659 glycosyl compound biosynthetic process IEP Enrichment
BP GO:1990542 mitochondrial transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR018392 LysM_dom 74 117
No external refs found!