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  5. OT_01G06120.1

OT_01G06120.1


Description : GTP binding protein, second domain; TGS; GTP binding domain [Interproscan].


Gene families : OG_01_0000895 (OrthoFinder) Phylogenetic Tree(s): OG0000895_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_01G06120.1
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020603.43 tig00020603_g11774.t1 Developmentally-regulated G-protein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre01.g058886 30788735 Developmentally-regulated G-protein 2 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre06.g252450 30778490 Developmentally-regulated G-protein 3 OS=Arabidopsis thaliana 0.03 OrthoFinder
Dusal.0475s00005.1 33190714 TGS [Interproscan]. 0.03 OrthoFinder
EOD19489 No alias GTP binding domain; TGS; GTP binding protein, second... 0.03 OrthoFinder
PTI_01G05660.1 No alias TGS; GTP binding protein, second domain; GTP binding... 0.03 OrthoFinder
TP17G01080.1 No alias GTP binding protein, second domain; GTP binding domain;... 0.02 OrthoFinder
TP23G01180.1 No alias GTP binding protein, second domain; GTP binding domain;... 0.03 OrthoFinder
Transcript_contig_58468 58468 GTP binding domain [Interproscan]. 0.01 OrthoFinder
Vocar.0001s0457.1 32885646 GTP binding protein, second domain; TGS; GTP binding... 0.02 OrthoFinder
XM_003060098.1 MicpuC2_18691, 18691 TGS; GTP binding protein, second domain; GTP binding... 0.02 OrthoFinder
XM_003063028.1 MicpuC2_21894, 21894 TGS; GTP binding protein, second domain; GTP binding... 0.03 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61412.1_224 PRW61412 Developmentally-regulated G-3 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP Enrichment
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Enrichment
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
BP GO:0008272 sulfate transport IEP Enrichment
BP GO:0009112 nucleobase metabolic process IEP Enrichment
MF GO:0015116 sulfate transmembrane transporter activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
MF GO:0016778 diphosphotransferase activity IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0046112 nucleobase biosynthetic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0072348 sulfur compound transport IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR006073 GTP-bd 68 185
IPR031662 GTP-binding_2 188 295
IPR004095 TGS 296 368
No external refs found!