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  5. XM_003060721.1

XM_003060721.1 (MicpuC2_19354, 19354)


Aliases : MicpuC2_19354, 19354

Description : Ribosomal protein L7/L12, oligomerisation; Ribosomal protein L7/L12, C-terminal [Interproscan].


Gene families : OG_01_0000959 (OrthoFinder) Phylogenetic Tree(s): OG0000959_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003060721.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020704.55 tig00020704_g13199.t1 50S ribosomal protein L12, chloroplastic OS=Spinacia oleracea 0.02 OrthoFinder
Cre06.g293700 30779544, MRPL7 Protein biosynthesis.organelle translation... 0.02 OrthoFinder
Cre13.g581650 30784593, PRPL7 Protein biosynthesis.organelle translation... 0.08 OrthoFinder
Dusal.0015s00043.1 33190941 Ribosomal protein L7/L12, C-terminal; Ribosomal protein... 0.03 OrthoFinder
EOD36893 No alias Ribosomal protein L7/L12, C-terminal; Ribosomal protein... 0.02 OrthoFinder
OT_04G04890.1 No alias Ribosomal protein L7/L12, C-terminal; Ribosomal protein... 0.08 OrthoFinder
Sro25_g017190.1 Contig1417.g13058 Protein L7/L12 0.03 OrthoFinder
Sro25_g017220.1 Contig1417.g13061 Protein L7/L12 0.05 OrthoFinder
Sro25_g017240.1 Contig1417.g13063 Protein L7/L12 0.01 OrthoFinder
Sro51_chlor_g030340.1 Rpl12 Rpl12 0.04 OrthoFinder
TPCG00690.1 No alias Ribosomal protein L7/L12, oligomerisation; Ribosomal... 0.01 OrthoFinder
Vocar.0001s0073.1 32885974 Ribosomal protein L7/L12, oligomerisation; Ribosomal... 0.02 OrthoFinder
XM_002504795.1 MICPUN_98038, 98038 Ribosomal protein L7/L12, C-terminal; Ribosomal protein... 0.09 OrthoFinder
lcl|BLLF01000770.1_cds_GFH14816.1_9293 HaLaN_10937, GFH14816 Ribosomal protein L7/L12, oligomerisation; Ribosomal... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004019 adenylosuccinate synthase activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Enrichment
MF GO:0004635 phosphoribosyl-AMP cyclohydrolase activity IEP Enrichment
MF GO:0005261 cation channel activity IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006163 purine nucleotide metabolic process IEP Enrichment
BP GO:0006164 purine nucleotide biosynthetic process IEP Enrichment
BP GO:0006497 protein lipidation IEP Enrichment
BP GO:0006505 GPI anchor metabolic process IEP Enrichment
BP GO:0006506 GPI anchor biosynthetic process IEP Enrichment
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Enrichment
MF GO:0008320 protein transmembrane transporter activity IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009306 protein secretion IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
MF GO:0015252 proton channel activity IEP Enrichment
MF GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Enrichment
MF GO:0019238 cyclohydrolase activity IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0019725 cellular homeostasis IEP Enrichment
MF GO:0022884 macromolecule transmembrane transporter activity IEP Enrichment
MF GO:0031369 translation initiation factor binding IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
BP GO:0035592 establishment of protein localization to extracellular region IEP Enrichment
BP GO:0045454 cell redox homeostasis IEP Enrichment
MF GO:0046422 violaxanthin de-epoxidase activity IEP Enrichment
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0071692 protein localization to extracellular region IEP Enrichment
BP GO:0072521 purine-containing compound metabolic process IEP Enrichment
BP GO:0072522 purine-containing compound biosynthetic process IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140318 protein transporter activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR013823 Ribosomal_L7/L12_C 62 128
IPR008932 Ribosomal_L7/L12_oligo 4 53
No external refs found!