1. Home
  2. Species
  3. Micromonas pusilla
  4. Sequence
  5. XM_003060261.1

XM_003060261.1 (MicpuC2_2622, 2622)


Aliases : MicpuC2_2622, 2622

Description : Sorting nexin Vps5-like, C-terminal [Interproscan].


Gene families : OG_01_0000496 (OrthoFinder) Phylogenetic Tree(s): OG0000496_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003060261.1
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
Cre06.g281050 30778806, VPS5A Vesicle trafficking.endomembrane trafficking.protein... 0.02 OrthoFinder
Cz02g02130.t1 No alias Phox homologous domain [Interproscan]. 0.02 OrthoFinder
Cz15g10280.t1 No alias Sorting nexin Vps5-like, C-terminal; Phox homologous... 0.01 OrthoFinder
XM_002504397.1 MICPUN_61025, 61025 Phox homologous domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000911.1_cds_GFH15861.1_10338 HaLaN_12170, GFH15861 PX domain-containing protein 0.02 OrthoFinder
lcl|BLLF01000911.1_cds_GFH15862.1_10339 HaLaN_12171, GFH15862 Hypothetical protein 0.02 OrthoFinder
lcl|VRMN01000007.1_cds_KAA8493183.1_9484 KAA8493183 Phox homologous domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001671 ATPase activator activity IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
MF GO:0005047 signal recognition particle binding IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005685 U1 snRNP IEP Enrichment
CC GO:0005785 signal recognition particle receptor complex IEP Enrichment
BP GO:0006376 mRNA splice site selection IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
BP GO:0006810 transport IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0015297 antiporter activity IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
InterPro domains Description Start Stop
IPR015404 Vps5_C 202 333
No external refs found!