XM_003060176.1 (MicpuC2_18468, 18468)

Aliases : MicpuC2_18468, 18468

Description : U box domain [Interproscan].

Gene families : OG_01_0000010 (OrthoFinder) Phylogenetic Tree(s): OG0000010_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: XM_003060176.1
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
Cre06.g277300 30779740 Putative U-box domain-containing protein 55... 0.03 OrthoFinder
Cre09.g390356 30780572 No description available 0.04 OrthoFinder
Cz02g28310.t1 No alias Ankyrin repeat-containing domain; U box domain [Interproscan]. 0.02 OrthoFinder
Cz03g26190.t1 No alias U box domain [Interproscan]. 0.03 OrthoFinder
Dusal.0073s00017.1 33194600 WD40 repeat; U box domain [Interproscan]. 0.03 OrthoFinder
EOD03965 No alias Rab5L, rab family GTPase [Ensembl]. 0.01 OrthoFinder
EOD04977 No alias U box domain [Interproscan]. 0.04 OrthoFinder
OT_09G00420.1 No alias U box domain; WD40 repeat [Interproscan]. 0.02 OrthoFinder
Sro15_g010940.1 Contig791.g8820 Putative E3 ubiquitin-protein ligase LIN 0.01 OrthoFinder
TP16G00300.1 No alias Hypothetical protein 0.01 OrthoFinder
UNPLg00252.t1 No alias Ankyrin repeat-containing domain; U box domain; Ankyrin... 0.03 OrthoFinder
XM_002502612.1 MICPUN_58878, 58878 U box domain [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR003613 Ubox_domain 27 98
No external refs found!