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  5. XM_003056647.1

XM_003056647.1 (MicpuC2_46607, 46607)


Aliases : MicpuC2_46607, 46607

Description : DNA-directed DNA polymerase, family A, palm domain; 3'-5' exonuclease domain [Interproscan].


Gene families : OG_01_0002080 (OrthoFinder) Phylogenetic Tree(s): OG0002080_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003056647.1
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
lcl|BLLF01001796.1_cds_GFH21279.1_15756 HaLaN_18547, GFH21279 Hypothetical protein 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003887 DNA-directed DNA polymerase activity IEA Interproscan
BP GO:0006139 nucleobase-containing compound metabolic process IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
MF GO:0008408 3'-5' exonuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Enrichment
MF GO:0004089 carbonate dehydratase activity IEP Enrichment
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Enrichment
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030119 AP-type membrane coat adaptor complex IEP Enrichment
CC GO:0030131 clathrin adaptor complex IEP Enrichment
CC GO:0034719 SMN-Sm protein complex IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
InterPro domains Description Start Stop
IPR001098 DNA-dir_DNA_pol_A_palm_dom 726 909
IPR001098 DNA-dir_DNA_pol_A_palm_dom 576 696
IPR002562 3'-5'_exonuclease_dom 189 264
No external refs found!