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  5. Cpa|evm.model.tig00000190.40

Cpa|evm.model.tig00000190.40 (tig00000190_g13861.t1)


Aliases : tig00000190_g13861.t1

Description : Ethylene receptor OS=Nicotiana tabacum


Gene families : OG_01_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000190.40
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000042.236 tig00000042_g15634.t1 Probable histidine kinase 3 OS=Oryza sativa subsp. indica 0.04 OrthoFinder
Cpa|evm.model.tig00000042.59 tig00000254_g22474.t1 Ethylene receptor 1 OS=Brassica oleracea 0.05 OrthoFinder
Cpa|evm.model.tig00000093.235 tig00000093_g3661.t1 Histidine kinase 3 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cpa|evm.model.tig00000145.25 tig00000145_g8821.t1 Ethylene receptor 1 OS=Arabidopsis thaliana 0.08 OrthoFinder
Cpa|evm.model.tig00000254.26 tig00000254_g22474.t1 Ethylene receptor 1 OS=Brassica oleracea 0.05 OrthoFinder
Cpa|evm.model.tig00000403.48 tig00000403_g305.t1 Ethylene response sensor 1 OS=Arabidopsis thaliana 0.08 OrthoFinder
Cpa|evm.model.tig00000605.24 tig00000605_g2490.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00000889.2 tig00000889_g5289.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00001155.15 tig00001155_g7321.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00001249.15 tig00001249_g7788.t1 Histidine kinase 2 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cpa|evm.model.tig00001331.12 tig00001331_g8175.t1 Histidine kinase 2 OS=Arabidopsis thaliana 0.04 OrthoFinder
Cpa|evm.model.tig00020553.260 tig00020553_g10746.t1 Probable histidine kinase 6 OS=Oryza sativa subsp. japonica 0.06 OrthoFinder
Cpa|evm.model.tig00020629.10 tig00020629_g12331.t1 Probable histidine kinase 3 OS=Oryza sativa subsp. indica 0.04 OrthoFinder
Cpa|evm.model.tig00020660.47 tig00020660_g12551.t1 UDP-xylose transporter 1 OS=Arabidopsis thaliana 0.04 OrthoFinder
Cpa|evm.model.tig00020704.6 tig00020704_g13147.t1 Histidine kinase 5 OS=Arabidopsis thaliana 0.05 OrthoFinder
Cpa|evm.model.tig00020904.27 tig00020904_g15159.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00020943.57 tig00020943_g16300.t1 Ethylene receptor OS=Malus domestica 0.05 OrthoFinder
Cpa|evm.model.tig00020964.8 tig00020964_g16779.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00021348.103 tig00021348_g20609.t1 Probable histidine kinase 4 OS=Oryza sativa subsp. japonica 0.04 OrthoFinder
Dusal.0198s00010.1 33192678 Signal transduction response regulator, receiver domain;... 0.02 OrthoFinder
EOD13570 No alias Putative PAS domain sensor hybrid histidine kinase [Ensembl]. 0.02 OrthoFinder
Sro1939_g306550.1 Contig1997.g17090 Hybrid signal transduction histidine kinase J 0.01 OrthoFinder
Sro351_g124000.1 Contig4381.g32954 Respiration control sensor protein ArcB 0.02 OrthoFinder
SymbC1.scaffold3627.5 3627.5 Signal transduction response regulator, receiver domain... 0.01 OrthoFinder
TP03G08180.1 No alias Signal transduction response regulator, receiver domain... 0.01 OrthoFinder
Vocar.0001s0831.1 32884659 Archaeal/bacterial/fungal rhodopsins; Histidine... 0.03 OrthoFinder
lcl|BLLF01000561.1_cds_GFH12981.1_7458 HaLaN_08775, GFH12981 Signal transduction histidine kinase,... 0.02 OrthoFinder
lcl|BLLF01000561.1_cds_GFH12982.1_7459 HaLaN_08776, GFH12982 Signal transduction response regulator, receiver domain... 0.01 OrthoFinder
lcl|BLLF01001311.1_cds_GFH18511.1_12988 HaLaN_15330, GFH18511 Histidine kinase/HSP90-like ATPase [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01004756.1_cds_GFH30189.1_24666 HaLaN_28989, GFH30189 Signal transduction histidine kinase,... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA Interproscan
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR003594 HATPase_C 848 968
IPR001789 Sig_transdc_resp-reg_receiver 1349 1440
IPR003018 GAF 373 521
IPR003018 GAF 562 710
IPR003661 HisK_dim/P 747 810
No external refs found!