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  5. XM_002507347.1

XM_002507347.1 (MICPUN_93299, 93299)


Aliases : MICPUN_93299, 93299

Description : Ribonucleoside-diphosphate reductase


Gene families : OG_01_0001485 (OrthoFinder) Phylogenetic Tree(s): OG0001485_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002507347.1
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Cre12.g492950 30792262, RIR1 Nucleotide metabolism.deoxynucleotide... 0.03 OrthoFinder
Cz10g19230.t1 No alias ATP-cone domain; Ribonucleotide reductase large subunit,... 0.02 OrthoFinder
Dusal.0285s00017.1 33192879 Ribonucleotide reductase large subunit, C-terminal;... 0.02 OrthoFinder
EOD13106 No alias Ribonucleotide reductase large subunit, C-terminal... 0.05 OrthoFinder
OT_01G00090.1 No alias Ribonucleotide reductase large subunit, C-terminal;... 0.09 OrthoFinder
PTI_01G04160.1 No alias Ribonucleotide reductase large subunit, C-terminal;... 0.04 OrthoFinder
Sro399_g134840.1 Contig279.g3611 Ribonucleoside-diphosphate reductase large 0.02 OrthoFinder
Sro785_g202090.1 Contig2407.g19687 Ribonucleoside-diphosphate reductase large 0.01 OrthoFinder
SymbC1.scaffold9656.2 9656.2 Ribonucleotide reductase large subunit, C-terminal;... 0.01 OrthoFinder
TP04G01330.1 No alias Ribonucleotide reductase large subunit, N-terminal;... 0.01 OrthoFinder
Transcript_contig_53771 53771 Ribonucleotide reductase large subunit, C-terminal;... 0.01 OrthoFinder
lcl|BLLF01000014.1_cds_GFH05936.1_413 HaLaN_00482, GFH05936 Ribonucleoside-diphosphate reductase 0.02 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8496054.1_2052 KAA8496054 Ribonucleoside-diphosphate reductase large subunit 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0004146 dihydrofolate reductase activity IEP Enrichment
MF GO:0004556 alpha-amylase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006575 cellular modified amino acid metabolic process IEP Enrichment
BP GO:0006760 folic acid-containing compound metabolic process IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007096 regulation of exit from mitosis IEP Enrichment
BP GO:0007346 regulation of mitotic cell cycle IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Enrichment
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016160 amylase activity IEP Enrichment
MF GO:0016278 lysine N-methyltransferase activity IEP Enrichment
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Enrichment
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Enrichment
CC GO:0031262 Ndc80 complex IEP Enrichment
MF GO:0042054 histone methyltransferase activity IEP Enrichment
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0046653 tetrahydrofolate metabolic process IEP Enrichment
BP GO:0046654 tetrahydrofolate biosynthetic process IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
CC GO:0099080 supramolecular complex IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
BP GO:1901987 regulation of cell cycle phase transition IEP Enrichment
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP Enrichment
InterPro domains Description Start Stop
IPR000788 RNR_lg_C 217 763
IPR013509 RNR_lsu_N 144 213
IPR005144 ATP-cone_dom 3 91
No external refs found!