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  5. XM_002506777.1

XM_002506777.1 (MICPUN_89118, 89118)


Aliases : MICPUN_89118, 89118

Description : RNA recognition motif domain [Interproscan].


Gene families : OG_01_0000163 (OrthoFinder) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002506777.1
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000383.37 tig00000383_g24647.t1 Splicing factor U2af large subunit A OS=Nicotiana plumbaginifolia 0.01 OrthoFinder
Cre07.g352650 30775322 No description available 0.04 OrthoFinder
Cre09.g391949 30781196 RNA processing.RNA splicing.U2-type-intron-specific... 0.03 OrthoFinder
Dusal.0862s00006.1 33191519 Hypothetical protein 0.02 OrthoFinder
Transcript_contig_55128 55128 Hypothetical protein 0.01 OrthoFinder
Transcript_contig_56236 56236 RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder
UNPLg00510.t1 No alias RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder
Vocar.0044s0038.1 32896597 RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499756.1_8709 KAA8499756 Protein ycf21 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0004857 enzyme inhibitor activity IEP Enrichment
MF GO:0004864 protein phosphatase inhibitor activity IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005685 U1 snRNP IEP Enrichment
BP GO:0005976 polysaccharide metabolic process IEP Enrichment
BP GO:0006376 mRNA splice site selection IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
BP GO:0010921 regulation of phosphatase activity IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016161 beta-amylase activity IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
CC GO:0017119 Golgi transport complex IEP Enrichment
MF GO:0019208 phosphatase regulator activity IEP Enrichment
MF GO:0019212 phosphatase inhibitor activity IEP Enrichment
BP GO:0019220 regulation of phosphate metabolic process IEP Enrichment
MF GO:0019888 protein phosphatase regulator activity IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
BP GO:0031399 regulation of protein modification process IEP Enrichment
BP GO:0032268 regulation of cellular protein metabolic process IEP Enrichment
BP GO:0035303 regulation of dephosphorylation IEP Enrichment
BP GO:0035304 regulation of protein dephosphorylation IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0050790 regulation of catalytic activity IEP Enrichment
BP GO:0051174 regulation of phosphorus metabolic process IEP Enrichment
BP GO:0051336 regulation of hydrolase activity IEP Enrichment
BP GO:0065009 regulation of molecular function IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR000504 RRM_dom 344 413
No external refs found!