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  5. XM_002506000.1

XM_002506000.1 (MICPUN_88315, 88315)


Aliases : MICPUN_88315, 88315

Description : ATP-binding cassette superfamily


Gene families : OG_01_0000325 (OrthoFinder) Phylogenetic Tree(s): OG0000325_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002506000.1
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021126.3 tig00021126_g18456.t1 ABC transporter B family member 24, mitochondrial... 0.01 OrthoFinder
OT_01G00530.1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
Transcript_contig_67533 67533 ABC transporter-like [Interproscan]. 0.03 OrthoFinder
XM_003061531.1 MicpuC2_28771, 28771 ATP-binding cassette superfamily 0.03 OrthoFinder
lcl|LHPG02000020.1_cds_PRW21097.1_4913 PRW21097 ATP-binding cassette sub-family B member mitochondrial isoform B 0.02 OrthoFinder
lcl|LHPG02000020.1_cds_PRW21098.1_4914 PRW21098 ATP-binding cassette sub-family B member mitochondrial isoform A 0.02 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497296.1_1025 KAA8497296 ATP-binding cassette sub-family B member 7, mitochondrial 0.02 OrthoFinder
lcl|VRMN01000009.1_cds_KAA8492609.1_9302 KAA8492609 ABC transporter B family member 25 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000097 sulfur amino acid biosynthetic process IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0005048 signal sequence binding IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
BP GO:0005984 disaccharide metabolic process IEP Enrichment
BP GO:0005991 trehalose metabolic process IEP Enrichment
BP GO:0005992 trehalose biosynthetic process IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006166 purine ribonucleoside salvage IEP Enrichment
BP GO:0006190 inosine salvage IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006535 cysteine biosynthetic process from serine IEP Enrichment
BP GO:0006563 L-serine metabolic process IEP Enrichment
BP GO:0006621 protein retention in ER lumen IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008252 nucleotidase activity IEP Enrichment
MF GO:0008253 5'-nucleotidase activity IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0008374 O-acyltransferase activity IEP Enrichment
MF GO:0009001 serine O-acetyltransferase activity IEP Enrichment
BP GO:0009070 serine family amino acid biosynthetic process IEP Enrichment
BP GO:0009119 ribonucleoside metabolic process IEP Enrichment
BP GO:0009163 nucleoside biosynthetic process IEP Enrichment
BP GO:0009311 oligosaccharide metabolic process IEP Enrichment
BP GO:0009312 oligosaccharide biosynthetic process IEP Enrichment
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0016412 serine O-acyltransferase activity IEP Enrichment
MF GO:0016413 O-acetyltransferase activity IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0016987 sigma factor activity IEP Enrichment
BP GO:0019344 cysteine biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
CC GO:0030126 COPI vesicle coat IEP Enrichment
BP GO:0030490 maturation of SSU-rRNA IEP Enrichment
MF GO:0030515 snoRNA binding IEP Enrichment
BP GO:0032507 maintenance of protein location in cell IEP Enrichment
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Enrichment
MF GO:0042277 peptide binding IEP Enrichment
BP GO:0042278 purine nucleoside metabolic process IEP Enrichment
BP GO:0042451 purine nucleoside biosynthetic process IEP Enrichment
BP GO:0042455 ribonucleoside biosynthetic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043094 cellular metabolic compound salvage IEP Enrichment
BP GO:0043101 purine-containing compound salvage IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043174 nucleoside salvage IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
BP GO:0045185 maintenance of protein location IEP Enrichment
BP GO:0046102 inosine metabolic process IEP Enrichment
BP GO:0046103 inosine biosynthetic process IEP Enrichment
BP GO:0046128 purine ribonucleoside metabolic process IEP Enrichment
BP GO:0046129 purine ribonucleoside biosynthetic process IEP Enrichment
BP GO:0046351 disaccharide biosynthetic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0046923 ER retention sequence binding IEP Enrichment
MF GO:0050483 IMP 5'-nucleotidase activity IEP Enrichment
BP GO:0051235 maintenance of location IEP Enrichment
BP GO:0051651 maintenance of location in cell IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0072595 maintenance of protein localization in organelle IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
BP GO:1901659 glycosyl compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 17 285
IPR003439 ABC_transporter-like_ATP-bd 354 508
No external refs found!