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Aliases : MICPUN_59549, 59549
Description : NOP5, N-terminal; Nop domain [Interproscan].
Gene families : OG_01_0003488 (OrthoFinder) Phylogenetic Tree(s): OG0003488_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: XM_002502937.1 | |
| Cluster | HCCA: Cluster_51 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00001073.20 | tig00001073_g6828.t1 | RNA processing.RNA modification.rRNA/tRNA... | 0.08 | OrthoFinder | |
| Cre12.g525200 | 30792563, NOP56 | RNA processing.RNA modification.rRNA/tRNA... | 0.1 | OrthoFinder | |
| Cz05g21140.t1 | No alias | NOP5, N-terminal; Nop domain [Interproscan]. | 0.07 | OrthoFinder | |
| Dusal.0189s00007.1 | 33201868 | NOP5, N-terminal; Nop domain [Interproscan]. | 0.05 | OrthoFinder | |
| EOD27783 | No alias | Nop domain; NOP5, N-terminal [Interproscan]. | 0.06 | OrthoFinder | |
| OT_08G00480.1 | No alias | NOP5, N-terminal; Nop domain [Interproscan]. | 0.08 | OrthoFinder | |
| PTI_03G02870.1 | No alias | NOP5, N-terminal; Nop domain [Interproscan]. | 0.03 | OrthoFinder | |
| Sro827_g207860.1 | Contig2896.g23091 | Nucleolar protein 58 | 0.07 | OrthoFinder | |
| TP01G09720.1 | No alias | NOP5, N-terminal; Nop domain [Interproscan]. | 0.03 | OrthoFinder | |
| Transcript_contig_55629 | 55629 | NOP5, N-terminal; Nop domain [Interproscan]. | 0.04 | OrthoFinder | |
| XM_003058716.1 | MicpuC2_33398, 33398 | NOP5, N-terminal; Nop domain [Interproscan]. | 0.09 | OrthoFinder | |
| lcl|BLLF01000053.1_cds_GFH06734.1_1211 | HaLaN_01415, GFH06734 | Nucleolar protein, component of C/D snoRNPs | 0.05 | OrthoFinder | |
| lcl|LHPG02000021.1_cds_PRW20780.1_5037 | PRW20780 | Nucleolar 56 | 0.07 | OrthoFinder | |
| lcl|VRMN01000011.1_cds_KAA8491775.1_4783 | KAA8491775 | Nucleolar protein 56 | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Enrichment |
| MF | GO:0004527 | exonuclease activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | Enrichment |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006351 | transcription, DNA-templated | IEP | Enrichment |
| BP | GO:0006364 | rRNA processing | IEP | Enrichment |
| BP | GO:0006396 | RNA processing | IEP | Enrichment |
| BP | GO:0006399 | tRNA metabolic process | IEP | Enrichment |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| MF | GO:0008168 | methyltransferase activity | IEP | Enrichment |
| MF | GO:0008175 | tRNA methyltransferase activity | IEP | Enrichment |
| MF | GO:0008176 | tRNA (guanine-N7-)-methyltransferase activity | IEP | Enrichment |
| BP | GO:0009116 | nucleoside metabolic process | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| BP | GO:0016072 | rRNA metabolic process | IEP | Enrichment |
| MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | Enrichment |
| MF | GO:0016740 | transferase activity | IEP | Enrichment |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Enrichment |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Enrichment |
| CC | GO:0030684 | preribosome | IEP | Enrichment |
| CC | GO:0032040 | small-subunit processome | IEP | Enrichment |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Enrichment |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Enrichment |
| BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Enrichment |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
| BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
| MF | GO:0046983 | protein dimerization activity | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | Enrichment |
| MF | GO:0097747 | RNA polymerase activity | IEP | Enrichment |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Enrichment |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Enrichment |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| BP | GO:1901657 | glycosyl compound metabolic process | IEP | Enrichment |
| No external refs found! |