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  5. XM_002502020.1

XM_002502020.1 (MICPUN_58459, 58459)


Aliases : MICPUN_58459, 58459

Description : Photosynthesis system II assembly factor Ycf48/Hcf136-like domain [Interproscan].


Gene families : OG_01_0003736 (OrthoFinder) Phylogenetic Tree(s): OG0003736_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_002502020.1
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
Cre06.g273700 30778394 Photosynthesis.photophosphorylation.photosystem... 0.06 OrthoFinder
Cz10g21040.t1 No alias Photosynthesis system II assembly factor... 0.02 OrthoFinder
Dusal.0002s00028.1 33187970 Photosynthesis system II assembly factor... 0.02 OrthoFinder
EOD42170 No alias Photosynthesis system II assembly factor... 0.02 OrthoFinder
PTI_13G02840.1 No alias Photosynthesis system II assembly factor... 0.03 OrthoFinder
Sro5_g004430.1 Contig4001.g30758 II stability/assembly factor HCF136, chloroplastic 0.07 OrthoFinder
TP22G01760.1 No alias Photosynthesis system II assembly factor... 0.05 OrthoFinder
Vocar.0002s0344.1 32890876 Photosynthesis system II assembly factor... 0.04 OrthoFinder
XM_003057421.1 MicpuC2_32576, 32576 Photosynthesis system II assembly factor... 0.08 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61576.1_616 PRW61576 Photosystem II stability assembly factor chloroplastic 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003873 6-phosphofructo-2-kinase activity IEP Enrichment
MF GO:0003997 acyl-CoA oxidase activity IEP Enrichment
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Enrichment
MF GO:0004743 pyruvate kinase activity IEP Enrichment
MF GO:0004807 triose-phosphate isomerase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005777 peroxisome IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0005984 disaccharide metabolic process IEP Enrichment
BP GO:0005991 trehalose metabolic process IEP Enrichment
BP GO:0005992 trehalose biosynthetic process IEP Enrichment
BP GO:0006000 fructose metabolic process IEP Enrichment
BP GO:0006081 cellular aldehyde metabolic process IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006090 pyruvate metabolic process IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006635 fatty acid beta-oxidation IEP Enrichment
BP GO:0006788 heme oxidation IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
MF GO:0008146 sulfotransferase activity IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008443 phosphofructokinase activity IEP Enrichment
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Enrichment
BP GO:0009062 fatty acid catabolic process IEP Enrichment
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Enrichment
BP GO:0009311 oligosaccharide metabolic process IEP Enrichment
BP GO:0009312 oligosaccharide biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
BP GO:0016042 lipid catabolic process IEP Enrichment
BP GO:0016054 organic acid catabolic process IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
MF GO:0019200 carbohydrate kinase activity IEP Enrichment
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Enrichment
BP GO:0019395 fatty acid oxidation IEP Enrichment
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0030258 lipid modification IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0030955 potassium ion binding IEP Enrichment
MF GO:0031420 alkali metal ion binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
BP GO:0034440 lipid oxidation IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
BP GO:0042168 heme metabolic process IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
CC GO:0042579 microbody IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044242 cellular lipid catabolic process IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0046351 disaccharide biosynthetic process IEP Enrichment
BP GO:0046395 carboxylic acid catabolic process IEP Enrichment
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Enrichment
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Enrichment
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Enrichment
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Enrichment
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0071586 CAAX-box protein processing IEP Enrichment
BP GO:0072329 monocarboxylic acid catabolic process IEP Enrichment
MF GO:0098809 nitrite reductase activity IEP Enrichment
InterPro domains Description Start Stop
IPR028203 PSII_CF48-like_dom 95 422
No external refs found!