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  5. lcl|BLLF01002502.1_cds_GFH24318.1_18795

lcl|BLLF01002502.1_cds_GFH24318.1_18795 (HaLaN_22091, GFH24318)


Aliases : HaLaN_22091, GFH24318

Description : ATP-binding cassette transporter


Gene families : OG_01_0000036 (OrthoFinder) Phylogenetic Tree(s): OG0000036_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01002502.1_cds_GFH24318.1_18795
Cluster HCCA: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000025.1 tig00000025_g7909.t2 Solute transport.primary active transport.ABC... 0.02 OrthoFinder
Cpa|evm.model.tig00000572.5 tig00000572_g2208.t1 Solute transport.primary active transport.ABC... 0.01 OrthoFinder
Cre17.g725150 30782210 ABC transporter B family member 7 OS=Arabidopsis thaliana 0.01 OrthoFinder
EOD33358 No alias Putative ABC transporter [Ensembl]. 0.01 OrthoFinder
PTI_00G03030.1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
Sro1234_g254930.1 Contig2459.g20128 Probable microcin-H47 secretion/processing ATP-binding... 0.01 OrthoFinder
Sro1631_g287230.1 Contig2461.g20146 Leptomycin B resistance protein pmd1 0.02 OrthoFinder
TP03G09080.1 No alias ABC transporter-like; ABC transporter type 1,... 0.01 OrthoFinder
XM_002505595.1 MICPUN_87670, 87670 ATP-binding cassette superfamily 0.01 OrthoFinder
XM_002505884.1 MICPUN_88240, 88240 ATP-binding cassette superfamily 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Enrichment
MF GO:0004743 pyruvate kinase activity IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
MF GO:0019239 deaminase activity IEP Enrichment
BP GO:0019725 cellular homeostasis IEP Enrichment
MF GO:0030955 potassium ion binding IEP Enrichment
MF GO:0031420 alkali metal ion binding IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
BP GO:0045454 cell redox homeostasis IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 273 421
IPR011527 ABC1_TM_dom 63 230
IPR011527 ABC1_TM_dom 547 783
IPR003439 ABC_transporter-like_ATP-bd 850 998
No external refs found!