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  5. lcl|BLLF01002156.1_cds_GFH22929.1_17406

lcl|BLLF01002156.1_cds_GFH22929.1_17406 (HaLaN_20465, GFH22929)


Aliases : HaLaN_20465, GFH22929

Description : Voltage-gated Ca2+ channel, alpha subunit


Gene families : OG_01_0000077 (OrthoFinder) Phylogenetic Tree(s): OG0000077_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01002156.1_cds_GFH22929.1_17406
Cluster HCCA: Cluster_248

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000093.245 tig00000093_g3667.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00000405.21 tig00000405_g453.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00000498.13 tig00000498_g1589.t1 No description available 0.02 OrthoFinder
Cre10.g444850 30790145, CAV7 No description available 0.04 OrthoFinder
Cre12.g532350 30792883, CAV8 No description available 0.03 OrthoFinder
Cre16.g665050 30777353, CAV2 No description available 0.02 OrthoFinder
Cre16.g665100 30777025, CAV3 No description available 0.02 OrthoFinder
Cre16.g667350 30778190, CAV6 No description available 0.03 OrthoFinder
Cre16.g667451 30777477 No description available 0.02 OrthoFinder
Cre17.g720600 30782719, CAV1 No description available 0.04 OrthoFinder
Dusal.0044s00007.1 33194913 Ion transport domain [Interproscan]. 0.02 OrthoFinder
OT_01G01330.1 No alias Ion transport domain [Interproscan]. 0.01 OrthoFinder
Vocar.0004s0321.1 32889539 Ion transport domain [Interproscan]. 0.02 OrthoFinder
Vocar.0017s0009.1 32891450 Ion transport domain [Interproscan]. 0.02 OrthoFinder
Vocar.0039s0004.1 32897784 Ion transport domain [Interproscan]. 0.02 OrthoFinder
Vocar.0066s0019.1 32891735 Ion transport domain [Interproscan]. 0.02 OrthoFinder
XM_003062020.1 MicpuC2_21004, 21004 Voltage-gated ion channel superfamily 0.03 OrthoFinder
XM_003062221.1 MicpuC2_21063, 21063 Voltage-gated ion channel superfamily 0.01 OrthoFinder
lcl|BLLF01000397.1_cds_GFH11377.1_5854 HaLaN_06864, GFH11377 EF-hand domain-containing protein 0.03 OrthoFinder
lcl|BLLF01000397.1_cds_GFH11380.1_5857 HaLaN_06867, GFH11380 EF-hand domain-containing protein 0.01 OrthoFinder
lcl|BLLF01000407.1_cds_GFH11469.1_5946 HaLaN_06970, GFH11469 Ion transport domain [Interproscan]. 0.05 OrthoFinder
lcl|BLLF01000792.1_cds_GFH14993.1_9470 HaLaN_11140, GFH14993 Ion transport domain [Interproscan]. 0.06 OrthoFinder
lcl|BLLF01000954.1_cds_GFH16151.1_10628 HaLaN_12520, GFH16151 Voltage-gated Ca2+ channel, alpha subunit 0.04 OrthoFinder
lcl|BLLF01002646.1_cds_GFH24840.1_19317 HaLaN_22705, GFH24840 Hypothetical protein 0.02 OrthoFinder
lcl|LHPG02000020.1_cds_PRW21007.1_4821 PRW21007 Voltage-gated ion channel superfamily 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 41 239
No external refs found!