Aliases : HaLaN_19826, GFH22370
Description : WD_REPEATS_REGION domain-containing protein
Gene families : OG_01_0002703 (OrthoFinder) Phylogenetic Tree(s): OG0002703_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: lcl|BLLF01002027.1_cds_GFH22370.1_16847 | |
Cluster | HCCA: Cluster_38 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00020927.23 | tig00020927_g15952.t1 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.04 | OrthoFinder | |
Cre03.g196850 | 30787480 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.05 | OrthoFinder | |
Cz10g12180.t1 | No alias | U3 small nucleolar RNA-associated protein 15,... | 0.04 | OrthoFinder | |
EOD28493 | No alias | U3 small nucleolar RNA-associated protein 15,... | 0.05 | OrthoFinder | |
OT_15G01400.1 | No alias | WD40 repeat; U3 small nucleolar RNA-associated protein... | 0.08 | OrthoFinder | |
PTI_02G05950.1 | No alias | U3 small nucleolar RNA-associated protein 15,... | 0.06 | OrthoFinder | |
Sro203_g085690.1 | Contig1270.g11863 | Associated protein 15 homolog | 0.06 | OrthoFinder | |
XM_002502959.1 | MICPUN_108508, 108508 | WD40 repeat; U3 small nucleolar RNA-associated protein... | 0.04 | OrthoFinder | |
XM_003058696.1 | MicpuC2_67965, 67965 | U3 small nucleolar RNA-associated protein 15,... | 0.02 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8497875.1_6828 | KAA8497875 | U3 small nucleolar RNA-associated protein 15-like | 0.06 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
BP | GO:0001510 | RNA methylation | IEP | Enrichment |
BP | GO:0001522 | pseudouridine synthesis | IEP | Enrichment |
MF | GO:0003674 | molecular_function | IEP | Enrichment |
MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
MF | GO:0003723 | RNA binding | IEP | Enrichment |
MF | GO:0003743 | translation initiation factor activity | IEP | Enrichment |
MF | GO:0003824 | catalytic activity | IEP | Enrichment |
MF | GO:0004386 | helicase activity | IEP | Enrichment |
MF | GO:0004674 | protein serine/threonine kinase activity | IEP | Enrichment |
MF | GO:0005488 | binding | IEP | Enrichment |
MF | GO:0005524 | ATP binding | IEP | Enrichment |
CC | GO:0005575 | cellular_component | IEP | Enrichment |
CC | GO:0005634 | nucleus | IEP | Enrichment |
CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | Enrichment |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
BP | GO:0006364 | rRNA processing | IEP | Enrichment |
BP | GO:0006396 | RNA processing | IEP | Enrichment |
BP | GO:0006399 | tRNA metabolic process | IEP | Enrichment |
BP | GO:0006400 | tRNA modification | IEP | Enrichment |
BP | GO:0006413 | translational initiation | IEP | Enrichment |
BP | GO:0006520 | cellular amino acid metabolic process | IEP | Enrichment |
BP | GO:0006553 | lysine metabolic process | IEP | Enrichment |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
BP | GO:0008033 | tRNA processing | IEP | Enrichment |
MF | GO:0008094 | ATPase, acting on DNA | IEP | Enrichment |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | Enrichment |
BP | GO:0008150 | biological_process | IEP | Enrichment |
BP | GO:0008152 | metabolic process | IEP | Enrichment |
MF | GO:0008168 | methyltransferase activity | IEP | Enrichment |
MF | GO:0008173 | RNA methyltransferase activity | IEP | Enrichment |
MF | GO:0008175 | tRNA methyltransferase activity | IEP | Enrichment |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Enrichment |
MF | GO:0008839 | 4-hydroxy-tetrahydrodipicolinate reductase | IEP | Enrichment |
BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Enrichment |
BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Enrichment |
BP | GO:0009085 | lysine biosynthetic process | IEP | Enrichment |
BP | GO:0009089 | lysine biosynthetic process via diaminopimelate | IEP | Enrichment |
BP | GO:0009451 | RNA modification | IEP | Enrichment |
MF | GO:0009982 | pseudouridine synthase activity | IEP | Enrichment |
BP | GO:0009987 | cellular process | IEP | Enrichment |
BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
BP | GO:0016072 | rRNA metabolic process | IEP | Enrichment |
MF | GO:0016426 | tRNA (adenine) methyltransferase activity | IEP | Enrichment |
MF | GO:0016429 | tRNA (adenine-N1-)-methyltransferase activity | IEP | Enrichment |
MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | Enrichment |
MF | GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | IEP | Enrichment |
MF | GO:0016740 | transferase activity | IEP | Enrichment |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Enrichment |
MF | GO:0016782 | transferase activity, transferring sulphur-containing groups | IEP | Enrichment |
MF | GO:0016866 | intramolecular transferase activity | IEP | Enrichment |
MF | GO:0016887 | ATPase | IEP | Enrichment |
MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
MF | GO:0017150 | tRNA dihydrouridine synthase activity | IEP | Enrichment |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Enrichment |
BP | GO:0030488 | tRNA methylation | IEP | Enrichment |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
MF | GO:0031369 | translation initiation factor binding | IEP | Enrichment |
CC | GO:0031515 | tRNA (m1A) methyltransferase complex | IEP | Enrichment |
BP | GO:0032259 | methylation | IEP | Enrichment |
MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
CC | GO:0034708 | methyltransferase complex | IEP | Enrichment |
MF | GO:0035596 | methylthiotransferase activity | IEP | Enrichment |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
MF | GO:0036094 | small molecule binding | IEP | Enrichment |
BP | GO:0042254 | ribosome biogenesis | IEP | Enrichment |
MF | GO:0043167 | ion binding | IEP | Enrichment |
MF | GO:0043168 | anion binding | IEP | Enrichment |
BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
CC | GO:0043226 | organelle | IEP | Enrichment |
CC | GO:0043227 | membrane-bounded organelle | IEP | Enrichment |
CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Enrichment |
BP | GO:0043414 | macromolecule methylation | IEP | Enrichment |
CC | GO:0043527 | tRNA methyltransferase complex | IEP | Enrichment |
BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | Enrichment |
BP | GO:0044085 | cellular component biogenesis | IEP | Enrichment |
BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
MF | GO:0045182 | translation regulator activity | IEP | Enrichment |
BP | GO:0046451 | diaminopimelate metabolic process | IEP | Enrichment |
BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
MF | GO:0050497 | alkylthioltransferase activity | IEP | Enrichment |
MF | GO:0051539 | 4 iron, 4 sulfur cluster binding | IEP | Enrichment |
BP | GO:0071704 | organic substance metabolic process | IEP | Enrichment |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | Enrichment |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Enrichment |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Enrichment |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Enrichment |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | Enrichment |
CC | GO:1990234 | transferase complex | IEP | Enrichment |
No InterPro domains available for this sequence
No external refs found! |