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  5. lcl|BLLF01001468.1_cds_GFH19468.1_13945

lcl|BLLF01001468.1_cds_GFH19468.1_13945 (HaLaN_16418, GFH19468)


Aliases : HaLaN_16418, GFH19468

Description : RING-type domain-containing protein


Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01001468.1_cds_GFH19468.1_13945
Cluster HCCA: Cluster_218

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000227.13 tig00000227_g19807.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00000402.5 tig00000402_g179.t1 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder
Cpa|evm.model.tig00001286.17 tig00001286_g8034.t1 Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder
Cpa|evm.model.tig00020943.22 tig00020943_g16264.t1 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder
Cre12.g501450 30793221 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder
Cz10g05080.t1 No alias Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
Cz10g28200.t1 No alias Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
Cz12g01140.t1 No alias Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
EOD04076 No alias Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
EOD18251 No alias Zinc finger, RING-type [Interproscan]. 0.03 OrthoFinder
Sro492_g153750.1 Contig2481.g20301 Zinc ion binding 0.01 OrthoFinder
Sro524_g159890.1 Contig202.g2386 Receptor homology region, transmembrane domain- and RING... 0.01 OrthoFinder
SymbC1.scaffold1145.3 1145.3 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold75.16 75.16 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
Transcript_contig_1388 1388 Hypothetical protein 0.01 OrthoFinder
Transcript_contig_56055 56055 Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
Transcript_contig_57423 57423 Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45336.1_1274 PRW45336 E3 ubiquitin-ligase SDIR1 isoform X1 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
CC GO:0000808 origin recognition complex IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005664 nuclear origin of replication recognition complex IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0019725 cellular homeostasis IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0045454 cell redox homeostasis IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment

No InterPro domains available for this sequence

No external refs found!