Aliases : HaLaN_12810, GFH16398
Description : Ribosome biogenesis slx9-like isoform X1
Gene families : OG_01_0003720 (OrthoFinder) Phylogenetic Tree(s): OG0003720_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: lcl|BLLF01000992.1_cds_GFH16398.1_10875 | |
Cluster | HCCA: Cluster_234 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
lcl|BLLF01001149.1_cds_GFH17451.1_11928 | HaLaN_14090, GFH17451 | Hypothetical protein | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEA | Interproscan |
CC | GO:0005730 | nucleolus | IEA | Interproscan |
CC | GO:0030686 | 90S preribosome | IEA | Interproscan |
CC | GO:0030688 | preribosome, small subunit precursor | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | Enrichment |
MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
MF | GO:0003824 | catalytic activity | IEP | Enrichment |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Enrichment |
MF | GO:0005488 | binding | IEP | Enrichment |
MF | GO:0005515 | protein binding | IEP | Enrichment |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Enrichment |
MF | GO:0008080 | N-acetyltransferase activity | IEP | Enrichment |
MF | GO:0016407 | acetyltransferase activity | IEP | Enrichment |
MF | GO:0016410 | N-acyltransferase activity | IEP | Enrichment |
MF | GO:0016740 | transferase activity | IEP | Enrichment |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Enrichment |
BP | GO:0043038 | amino acid activation | IEP | Enrichment |
BP | GO:0043039 | tRNA aminoacylation | IEP | Enrichment |
MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR028160 | Slx9-like | 43 | 151 |
No external refs found! |