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Aliases : tig00021432_g21227.t1
Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.NOG1 regulatory GTPase
Gene families : OG_01_0000915 (OrthoFinder) Phylogenetic Tree(s): OG0000915_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cpa|evm.model.tig00021432.35 | |
| Cluster | HCCA: Cluster_45 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cz08g30260.t1 | No alias | NOG1, N-terminal helical domain [Interproscan]. | 0.03 | OrthoFinder | |
| Cz08g30270.t1 | No alias | NOG, C-terminal; Nucleolar GTP-binding protein 1,... | 0.07 | OrthoFinder | |
| Cz08g30280.t1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| Dusal.0002s00037.1 | 33187953 | NOG1, N-terminal helical domain; Nucleolar GTP-binding... | 0.02 | OrthoFinder | |
| EOD04385 | No alias | NOG, C-terminal; NOG1, N-terminal helical domain;... | 0.06 | OrthoFinder | |
| OT_01G02430.1 | No alias | FeoB-type guanine nucleotide-binding (G) domain; NOG1,... | 0.03 | OrthoFinder | |
| OT_02G03790.1 | No alias | NOG1, N-terminal helical domain; NOG, C-terminal;... | 0.06 | OrthoFinder | |
| PTI_22G01420.1 | No alias | Nucleolar GTP-binding protein 1, Rossman-fold domain;... | 0.11 | OrthoFinder | |
| Sro789_g202710.1 | Contig1895.g16487 | Nucleolar GTP-binding protein 1 | 0.11 | OrthoFinder | |
| TP01G10380.1 | No alias | Nucleolar GTP-binding protein 1, Rossman-fold domain;... | 0.05 | OrthoFinder | |
| TP03G08460.1 | No alias | Nucleolar GTP-binding protein 1, Rossman-fold domain;... | 0.06 | OrthoFinder | |
| Transcript_contig_56581 | 56581 | NOG, C-terminal; NOG1, N-terminal helical domain;... | 0.09 | OrthoFinder | |
| Vocar.0008s0106.1 | 32897063 | Nucleolar GTP-binding protein 1, Rossman-fold domain... | 0.03 | OrthoFinder | |
| XM_002502367.1 | MICPUN_75968, 75968 | NOG1, N-terminal helical domain; Nucleolar GTP-binding... | 0.02 | OrthoFinder | |
| XM_002503141.1 | MICPUN_83165, 83165 | NOG, C-terminal; Nucleolar GTP-binding protein 1,... | 0.1 | OrthoFinder | |
| XM_003061158.1 | MicpuC2_28298, 28298 | Nucleolar GTP-binding protein 1, Rossman-fold domain;... | 0.06 | OrthoFinder | |
| lcl|BLLF01001181.1_cds_GFH17648.1_12125 | HaLaN_14326, GFH17648 | Putative nucleolar GTP-binding protein 1 | 0.05 | OrthoFinder | |
| lcl|BLLF01001454.1_cds_GFH19387.1_13864 | HaLaN_16328, GFH19387 | Nucleolar GTP-binding protein 1 | 0.03 | OrthoFinder | |
| lcl|LHPG02000004.1_cds_PRW59110.1_7015 | PRW59110 | Nucleolar GTP-binding 1 | 0.02 | OrthoFinder | |
| lcl|LHPG02000017.1_cds_PRW33235.1_3637 | PRW33235 | Nucleolar GTP-binding isoform B | 0.02 | OrthoFinder | |
| lcl|VRMN01000001.1_cds_KAA8498097.1_7050 | KAA8498097 | Nucleolar GTP-binding protein 1 | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Enrichment |
| BP | GO:0001522 | pseudouridine synthesis | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003743 | translation initiation factor activity | IEP | Enrichment |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Enrichment |
| MF | GO:0004809 | tRNA (guanine-N2-)-methyltransferase activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005515 | protein binding | IEP | Enrichment |
| CC | GO:0005730 | nucleolus | IEP | Enrichment |
| CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | Enrichment |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006351 | transcription, DNA-templated | IEP | Enrichment |
| BP | GO:0006364 | rRNA processing | IEP | Enrichment |
| BP | GO:0006396 | RNA processing | IEP | Enrichment |
| BP | GO:0006413 | translational initiation | IEP | Enrichment |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | Enrichment |
| BP | GO:0008152 | metabolic process | IEP | Enrichment |
| MF | GO:0008170 | N-methyltransferase activity | IEP | Enrichment |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Enrichment |
| MF | GO:0008175 | tRNA methyltransferase activity | IEP | Enrichment |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Enrichment |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0009451 | RNA modification | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| BP | GO:0016072 | rRNA metabolic process | IEP | Enrichment |
| MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | Enrichment |
| MF | GO:0016597 | amino acid binding | IEP | Enrichment |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Enrichment |
| MF | GO:0016743 | carboxyl- or carbamoyltransferase activity | IEP | Enrichment |
| MF | GO:0016763 | pentosyltransferase activity | IEP | Enrichment |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Enrichment |
| MF | GO:0016887 | ATPase | IEP | Enrichment |
| BP | GO:0030490 | maturation of SSU-rRNA | IEP | Enrichment |
| CC | GO:0030684 | preribosome | IEP | Enrichment |
| CC | GO:0032040 | small-subunit processome | IEP | Enrichment |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Enrichment |
| CC | GO:0032991 | protein-containing complex | IEP | Enrichment |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Enrichment |
| BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| MF | GO:0043177 | organic acid binding | IEP | Enrichment |
| BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
| BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
| MF | GO:0045182 | translation regulator activity | IEP | Enrichment |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
| BP | GO:0071704 | organic substance metabolic process | IEP | Enrichment |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | Enrichment |
| MF | GO:0097747 | RNA polymerase activity | IEP | Enrichment |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Enrichment |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Enrichment |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Enrichment |
| No external refs found! |