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  5. lcl|BLLF01000091.1_cds_GFH07389.1_1866

lcl|BLLF01000091.1_cds_GFH07389.1_1866 (HaLaN_02179, GFH07389)


Aliases : HaLaN_02179, GFH07389

Description : TRNA (adenine(58)-N(1))-methyltransferase


Gene families : OG_01_0003347 (OrthoFinder) Phylogenetic Tree(s): OG0003347_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000091.1_cds_GFH07389.1_1866
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021531.15 tig00021531_g22178.t1 RNA processing.RNA modification.rRNA/tRNA... 0.02 OrthoFinder
Cre05.g244236 30783167 RNA processing.RNA modification.rRNA/tRNA... 0.06 OrthoFinder
XM_002506202.1 MICPUN_88116, 88116 tRNA (1-methyladenosine) methyltransferase catalytic... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016429 tRNA (adenine-N1-)-methyltransferase activity IEA Interproscan
BP GO:0030488 tRNA methylation IEA Interproscan
CC GO:0031515 tRNA (m1A) methyltransferase complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR014816 tRNA_MeTrfase_Gcd14 36 115
No external refs found!