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  5. lcl|BLLF01000060.1_cds_GFH06870.1_1347

lcl|BLLF01000060.1_cds_GFH06870.1_1347 (HaLaN_01582, GFH06870)


Aliases : HaLaN_01582, GFH06870

Description : Protein transport protein SEC23


Gene families : OG_01_0001655 (OrthoFinder) Phylogenetic Tree(s): OG0001655_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000060.1_cds_GFH06870.1_1347
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Cre03.g180850 30786735, SEC23A Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 OrthoFinder
Dusal.0019s00025.1 33192535 Gelsolin-like domain; Zinc finger, Sec23/Sec24-type;... 0.01 OrthoFinder
EOD30731 No alias Sec23/Sec24 beta-sandwich; Gelsolin-like domain;... 0.02 OrthoFinder
OT_08G03330.1 No alias Sec23/Sec24 beta-sandwich; Zinc finger,... 0.02 OrthoFinder
Sro972_g226640.1 Contig330.g4393 Transport protein SEC23 0.02 OrthoFinder
XM_003059000.1 MicpuC2_33721, 33721 Gelsolin-like domain; Sec23/Sec24, helical domain;... 0.01 OrthoFinder
lcl|LHPG02000018.1_cds_PRW32992.1_3755 PRW32992 Transport SEC23-like 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEA Interproscan
CC GO:0030127 COPII vesicle coat IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004107 chorismate synthase activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004497 monooxygenase activity IEP Enrichment
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Enrichment
MF GO:0004743 pyruvate kinase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
MF GO:0030955 potassium ion binding IEP Enrichment
MF GO:0031420 alkali metal ion binding IEP Enrichment
BP GO:0032012 regulation of ARF protein signal transduction IEP Enrichment
CC GO:0034457 Mpp10 complex IEP Enrichment
BP GO:0046578 regulation of Ras protein signal transduction IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
BP GO:1902531 regulation of intracellular signal transduction IEP Enrichment
InterPro domains Description Start Stop
IPR006896 Sec23/24_trunk_dom 77 154
No external refs found!