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  5. EOD35541

EOD35541


Description : Putative ABC transporter [Ensembl].


Gene families : OG_01_0000036 (OrthoFinder) Phylogenetic Tree(s): OG0000036_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD35541
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000741.4 tig00000741_g3824.t1 ABC transporter B family member 21 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00020952.7 tig00020952_g16473.t1 ABC transporter B family member 2 OS=Arabidopsis thaliana 0.05 OrthoFinder
Cre02.g083354 30785555 Solute transport.primary active transport.ABC... 0.02 OrthoFinder
EOD22205 No alias Putative ABC transporter [Ensembl]. 0.03 OrthoFinder
Sro1631_g287230.1 Contig2461.g20146 Leptomycin B resistance protein pmd1 0.02 OrthoFinder
SymbC1.scaffold652.13 652.13 ABC transporter-like; ABC transporter type 1,... 0.01 OrthoFinder
Transcript_contig_57080 57080 ABC transporter-like [Interproscan]. 0.01 OrthoFinder
XM_002505884.1 MICPUN_88240, 88240 ATP-binding cassette superfamily 0.02 OrthoFinder
XM_003057040.1 MicpuC2_1092, 1092 ATP-binding cassette superfamily 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0005319 lipid transporter activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006869 lipid transport IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
BP GO:0120009 intermembrane lipid transfer IEP Enrichment
MF GO:0120013 lipid transfer activity IEP Enrichment
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 48 318
IPR011527 ABC1_TM_dom 755 967
IPR003439 ABC_transporter-like_ATP-bd 1037 1196
IPR003439 ABC_transporter-like_ATP-bd 392 551
No external refs found!