Description : EF-hand domain; ABC transporter type 1, transmembrane domain; ABC transporter-like [Interproscan].
Gene families : OG_01_0000039 (OrthoFinder) Phylogenetic Tree(s): OG0000039_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: EOD26066 | |
Cluster | HCCA: Cluster_137 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00000718.1 | tig00000718_g3679.t1 | ABC transporter C family member 2 OS=Arabidopsis thaliana | 0.02 | OrthoFinder | |
Cpa|evm.model.tig00000718.2 | tig00000718_g3679.t1 | ABC transporter C family member 2 OS=Arabidopsis thaliana | 0.03 | OrthoFinder | |
Cpa|evm.model.tig00000718.3 | tig00000718_g3679.t1 | ABC transporter C family member 6 OS=Arabidopsis thaliana | 0.03 | OrthoFinder | |
Cpa|evm.model.tig00001024.2 | tig00001729_g9740.t1 | ABC transporter C family member 14 OS=Arabidopsis thaliana | 0.02 | OrthoFinder | |
Cpa|evm.model.tig00001729.6 | tig00001729_g9740.t1 | Solute transport.primary active transport.ABC... | 0.02 | OrthoFinder | |
Cpa|evm.model.tig00020553.190 | tig00020553_g10680.t1 | ABC transporter C family member 4 OS=Arabidopsis thaliana | 0.03 | OrthoFinder | |
Cpa|evm.model.tig00020553.191 | tig00020553_g10681.t1 | ABC transporter C family member 11 OS=Arabidopsis thaliana | 0.03 | OrthoFinder | |
Cpa|evm.model.tig00020592.4 | tig00020592_g11633.t1 | ABC transporter C family member 1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder | |
Cre13.g564900 | 30784450, MRP3 | Solute transport.primary active transport.ABC... | 0.05 | OrthoFinder | |
Cre17.g734612 | 30781956, MRP2 | ABC transporter C family member 14 OS=Arabidopsis thaliana | 0.04 | OrthoFinder | |
Cz01g21260.t1 | No alias | ABC transporter type 1, transmembrane domain; ABC... | 0.03 | OrthoFinder | |
Cz05g17060.t1 | No alias | ABC transporter type 1, transmembrane domain; ABC... | 0.1 | OrthoFinder | |
Dusal.0852s00004.1 | 33185428 | ABC transporter-like; ABC transporter type 1,... | 0.02 | OrthoFinder | |
OT_03G00040.1 | No alias | ABC transporter type 1, transmembrane domain; ABC... | 0.03 | OrthoFinder | |
PTI_03G04630.1 | No alias | ABC transporter type 1, transmembrane domain; ABC... | 0.02 | OrthoFinder | |
PTI_03G06590.1 | No alias | ABC transporter type 1, transmembrane domain; ABC... | 0.02 | OrthoFinder | |
Sro1322_g262550.1 | Contig3764.g28905 | Multiple drug resistance-associated protein-like transporter 1 | 0.06 | OrthoFinder | |
Sro1659_g289200.1 | Contig194.g2262 | Oligomycin resistance ATP-dependent permease YOR1 | 0.01 | OrthoFinder | |
Sro183_g079600.1 | Contig3056.g24305 | Multiple drug resistance-associated protein-like transporter 1 | 0.03 | OrthoFinder | |
Sro200_g084620.1 | Contig201.g2353 | Oligomycin resistance ATP-dependent permease YOR1 | 0.02 | OrthoFinder | |
Sro399_g134960.1 | Contig279.g3623 | Multiple drug resistance-associated protein-like transporter 1 | 0.01 | OrthoFinder | |
Sro61_g035030.1 | Contig3112.g24756 | Multiple drug resistance-associated protein-like transporter 1 | 0.02 | OrthoFinder | |
SymbC1.scaffold3934.5 | 3934.5 | ABC transporter-like; ABC transporter type 1,... | 0.02 | OrthoFinder | |
TP07G05800.1 | No alias | ABC transporter-like; ABC transporter type 1,... | 0.03 | OrthoFinder | |
Transcript_contig_56405 | 56405 | ABC transporter type 1, transmembrane domain; ABC... | 0.01 | OrthoFinder | |
XM_002508173.1 | MICPUN_94915, 94915 | ATP-binding cassette superfamily | 0.1 | OrthoFinder | |
XM_003055793.1 | MicpuC2_55005, 55005 | ATP-binding cassette superfamily | 0.03 | OrthoFinder | |
XM_003055794.1 | MicpuC2_55006, 55006 | ATP-binding cassette superfamily | 0.02 | OrthoFinder | |
lcl|BLLF01000618.1_cds_GFH13488.1_7965 | HaLaN_09381, GFH13488 | ABC transporter | 0.02 | OrthoFinder | |
lcl|BLLF01003175.1_cds_GFH26596.1_21073 | HaLaN_24770, GFH26596 | ABC transporter type 1, transmembrane domain; ABC... | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005509 | calcium ion binding | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
CC | GO:0016021 | integral component of membrane | IEA | Interproscan |
MF | GO:0016887 | ATPase | IEA | Interproscan |
MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEA | Interproscan |
BP | GO:0055085 | transmembrane transport | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000049 | tRNA binding | IEP | Enrichment |
MF | GO:0003684 | damaged DNA binding | IEP | Enrichment |
MF | GO:0003906 | DNA-(apurinic or apyrimidinic site) endonuclease activity | IEP | Enrichment |
MF | GO:0003924 | GTPase activity | IEP | Enrichment |
MF | GO:0004222 | metalloendopeptidase activity | IEP | Enrichment |
MF | GO:0004359 | glutaminase activity | IEP | Enrichment |
MF | GO:0005319 | lipid transporter activity | IEP | Enrichment |
MF | GO:0005525 | GTP binding | IEP | Enrichment |
CC | GO:0005737 | cytoplasm | IEP | Enrichment |
BP | GO:0006081 | cellular aldehyde metabolic process | IEP | Enrichment |
BP | GO:0006284 | base-excision repair | IEP | Enrichment |
BP | GO:0006289 | nucleotide-excision repair | IEP | Enrichment |
BP | GO:0006508 | proteolysis | IEP | Enrichment |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
BP | GO:0006766 | vitamin metabolic process | IEP | Enrichment |
BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Enrichment |
BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Enrichment |
BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Enrichment |
BP | GO:0006783 | heme biosynthetic process | IEP | Enrichment |
BP | GO:0006784 | heme A biosynthetic process | IEP | Enrichment |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
BP | GO:0006869 | lipid transport | IEP | Enrichment |
BP | GO:0008152 | metabolic process | IEP | Enrichment |
MF | GO:0008237 | metallopeptidase activity | IEP | Enrichment |
BP | GO:0009110 | vitamin biosynthetic process | IEP | Enrichment |
BP | GO:0016043 | cellular component organization | IEP | Enrichment |
MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
MF | GO:0016624 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor | IEP | Enrichment |
MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | Enrichment |
MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | Enrichment |
MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | Enrichment |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | Enrichment |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Enrichment |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Enrichment |
BP | GO:0019725 | cellular homeostasis | IEP | Enrichment |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Enrichment |
BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Enrichment |
BP | GO:0042168 | heme metabolic process | IEP | Enrichment |
BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Enrichment |
BP | GO:0042440 | pigment metabolic process | IEP | Enrichment |
BP | GO:0042592 | homeostatic process | IEP | Enrichment |
BP | GO:0042816 | vitamin B6 metabolic process | IEP | Enrichment |
BP | GO:0042819 | vitamin B6 biosynthetic process | IEP | Enrichment |
BP | GO:0042822 | pyridoxal phosphate metabolic process | IEP | Enrichment |
BP | GO:0042823 | pyridoxal phosphate biosynthetic process | IEP | Enrichment |
BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
BP | GO:0045454 | cell redox homeostasis | IEP | Enrichment |
BP | GO:0046148 | pigment biosynthetic process | IEP | Enrichment |
BP | GO:0046160 | heme a metabolic process | IEP | Enrichment |
BP | GO:0046184 | aldehyde biosynthetic process | IEP | Enrichment |
BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Enrichment |
MF | GO:0051213 | dioxygenase activity | IEP | Enrichment |
BP | GO:0061024 | membrane organization | IEP | Enrichment |
BP | GO:0071702 | organic substance transport | IEP | Enrichment |
BP | GO:0071704 | organic substance metabolic process | IEP | Enrichment |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | Enrichment |
MF | GO:0071949 | FAD binding | IEP | Enrichment |
BP | GO:0072524 | pyridine-containing compound metabolic process | IEP | Enrichment |
BP | GO:0072525 | pyridine-containing compound biosynthetic process | IEP | Enrichment |
BP | GO:0120009 | intermembrane lipid transfer | IEP | Enrichment |
MF | GO:0120013 | lipid transfer activity | IEP | Enrichment |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Enrichment |
BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | Enrichment |
No external refs found! |