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  5. Cpa|evm.model.tig00020952.44

Cpa|evm.model.tig00020952.44 (tig00020952_g16502.t1)


Aliases : tig00020952_g16502.t1

Description : DNA damage response.DNA repair mechanisms.photoreactivation.class II photolyase (PHR1)


Gene families : OG_01_0000241 (OrthoFinder) Phylogenetic Tree(s): OG0000241_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020952.44
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
Cz05g06040.t1 No alias DNA photolyase, N-terminal [Interproscan]. 0.01 OrthoFinder
EOD11422 No alias DNA photolyase, N-terminal [Interproscan]. 0.01 OrthoFinder
EOD17389 No alias DNA photolyase, N-terminal [Interproscan]. 0.04 OrthoFinder
EOD36146 No alias DNA photolyase, N-terminal [Interproscan]. 0.01 OrthoFinder
OT_03G05680.1 No alias DNA photolyase, N-terminal [Interproscan]. 0.02 OrthoFinder
Sro50_g029020.1 Contig297.g3890 Deoxyribodipyrimidine photo-lyase 0.05 OrthoFinder
Sro592_g172190.1 Contig2562.g20821 Deoxyribodipyrimidine photo-lyase 0.05 OrthoFinder
XM_003060976.1 MicpuC2_10493, 10493 DNA photolyase, N-terminal [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01000623.1_cds_GFH13537.1_8014 HaLaN_09437, GFH13537 Photolyase/cryptochrome alpha/beta domain-containing protein 0.01 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61487.1_652 PRW61487 CPD photolyase isoform B 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0004788 thiamine diphosphokinase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016778 diphosphotransferase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR006050 DNA_photolyase_N 136 292
No external refs found!