Sequence Description Alias PCC hrr Cpa|evm.model.tig00021127.131 tig00021127_g18811.t1 0.9690268208309221 3 Cpa|evm.model.tig00020965.70 Cryptochrome DASH, chloroplastic/mitochondrial OS=Solanum lycopersicum tig00020965_g16882.t1 0.9669460098545251 2 Cpa|evm.model.tig00001071.14 Carotenoid 9,10(9,10)-cleavage dioxygenase 1 OS=Oncidium hybrid cultivar tig00001071_g6805.t1 0.9593083040073269 9 Cpa|evm.model.tig00021537.1 Puromycin-sensitive aminopeptidase OS=Arabidopsis thaliana tig00021537_g22258.t1 0.9553483729814712 4 Cpa|evm.model.tig00000204.80 Clavaminate synthase-like protein At3g21360 OS=Arabidopsis thaliana tig00000204_g17748.t1 0.9549529382254797 7 Cpa|evm.model.tig00000404.56 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00000404_g418.t1 0.952302447026622 11 Cpa|evm.model.tig00021617.18 tig00021617_g22945.t1 0.9517780097472733 7 Cpa|evm.model.tig00021254.26 tig00021254_g19706.t1 0.9491670164852872 8 Cpa|evm.model.tig00021616.13 tig00021616_g22918.t1 0.9485318635187667 9 Cpa|evm.model.tig00020965.69 Cryptochrome DASH, chloroplastic/mitochondrial OS=Solanum lycopersicum tig00020965_g16882.t1 0.9476834786813374 10 Cpa|evm.model.tig00000663.54 Protein degradation.peptidase families.serine-type peptidase activities.SppA plastidial protease tig00000663_g2987.t1 0.9452733774076133 21 Cpa|evm.model.tig00021135.14 tig00021135_g18935.t1 0.9435746134141709 12 Cpa|evm.model.tig00020675.83 Protein root UVB sensitive 1, chloroplastic OS=Arabidopsis thaliana tig00020675_g12662.t1 0.9420796006289813 13 Cpa|evm.model.tig00000144.28 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00000144_g9017.t1 0.9407785005523616 14 Cpa|evm.model.tig00000254.94 tig00000254_g22550.t1 0.9404001043363082 22 Cpa|evm.model.tig00001278.14 Coenzyme metabolism.thiamine pyrophosphate synthesis.thiamine diphosphokinase tig00001278_g7993.t1 0.938585480074372 16 Cpa|evm.model.tig00020553.186 tig00020553_g10675.t1 0.9368200016651628 17 Cpa|evm.model.tig00000459.54 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00000459_g1118.t1 0.9335159595484741 18 Cpa|evm.model.tig00001126.7 tig00001126_g7118.t1 0.9330960817376478 33 Cpa|evm.model.tig00021721.8 tig00021721_g23206.t1 0.932145170764027 36 Cpa|evm.model.tig00020553.190 ABC transporter C family member 4 OS=Arabidopsis thaliana tig00020553_g10680.t1 0.9318435812713068 32 Cpa|evm.model.tig00000378.18 tig00000378_g24509.t1 0.9317604050155944 26 Cpa|evm.model.tig00020539.39 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00020539_g10430.t1 0.9315538780805436 23 Cpa|evm.model.tig00000949.24 tig00000949_g5736.t1 0.9314408416998575 29 Cpa|evm.model.tig00000241.155 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.APE acclimation factor tig00000241_g21020.t1 0.9292727931563601 25 Cpa|evm.model.tig00022104.1 tig00022104_g23814.t1 0.9289224435196654 26 Cpa|evm.model.tig00000821.30 tig00000821_g4490.t1 0.9288956875643535 35 Cpa|evm.model.tig00020909.30 tig00020909_g15352.t1 0.9281595518652652 28 Cpa|evm.model.tig00021373.6 Peroxiredoxin Q, chloroplastic OS=Triticum aestivum tig00021373_g21073.t1 0.9275119291366194 29 Cpa|evm.model.tig00000981.5 tig00000981_g5860.t1 0.9237469093287616 30 Cpa|evm.model.tig00022075.74 tig00022075_g23635.t1 0.9232509428560599 31 Cpa|evm.model.tig00000655.47 tig00000655_g2872.t1 0.9203935125212068 44 Cpa|evm.model.tig00020556.38 tig00020556_g11006.t1 0.9185932054908487 33 Cpa|evm.model.tig00000344.14 0.9180135288310434 34 Cpa|evm.model.tig00020723.8 tig00020723_g13427.t1 0.9179422105098862 35 Cpa|evm.model.tig00020723.64 tig00020723_g13476.t2 0.9178994924351614 45 Cpa|evm.model.tig00001339.10 Protein SUPPRESSOR OF QUENCHING 1, chloroplastic OS=Arabidopsis thaliana tig00001339_g8266.t1 0.9175955282910956 42 Cpa|evm.model.tig00000248.21 Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana tig00000248_g21787.t1 0.9174804944110301 38 Cpa|evm.model.tig00000806.35 tig00000806_g4364.t1 0.9170894085057122 39 Cpa|evm.model.tig00020553.191 ABC transporter C family member 11 OS=Arabidopsis thaliana tig00020553_g10681.t1 0.9169616561805031 40 Cpa|evm.model.tig00001258.10 tig00001258_g7832.t1 0.9160248457224874 41 Cpa|evm.model.tig00021489.14 Sanguinarine reductase OS=Eschscholzia californica tig00021489_g21661.t1 0.9150381068099883 42 Cpa|evm.model.tig00000507.23 Flagellar radial spoke protein 5 OS=Chlamydomonas reinhardtii tig00000507_g1777.t1 0.9146154360215278 43 Cpa|evm.model.tig00000737.24 tig00000737_g3804.t1 0.9142859835580227 44 Cpa|evm.model.tig00001024.2 ABC transporter C family member 14 OS=Arabidopsis thaliana tig00001729_g9740.t1 0.9141794763000914 45 Cpa|evm.model.tig00000361.58 tig00000361_g24406.t1 0.9139139917031336 46 Cpa|evm.model.tig00021374.35 tig00021374_g21116.t1 0.9128147519714013 48 Cpa|evm.model.tig00021680.1 tig00021680_g23021.t1 0.9120406419364133 48 Cpa|evm.model.tig00021493.41 tig00021493_g21886.t1 0.9103027065891046 49 Cpa|evm.model.tig00000718.1 ABC transporter C family member 2 OS=Arabidopsis thaliana tig00000718_g3679.t1 0.9103010628728204 50 Cpa|evm.model.tig00020710.126 tig00020710_g13390.t1 0.9092109456873846 51 Cpa|evm.model.tig00020556.13 tig00020556_g10984.t1 0.9087783090559179 52 Cpa|evm.model.tig00020557.25 tig00020557_g11123.t1 0.9077982683862353 57 Cpa|evm.model.tig00000057.44 tig00000057_g63.t1 0.9065584726150928 54 Cpa|evm.model.tig00000551.6 tig00000551_g2028.t1 0.9062265350876609 55 Cpa|evm.model.tig00021680.19 tig00021680_g23041.t1 0.9048186603198106 56 Cpa|evm.model.tig00000492.83 tig00000492_g1477.t1 0.9030445174984669 57 Cpa|evm.model.tig00000955.24 tig00000955_g5799.t1 0.9022890920360913 64 Cpa|evm.model.tig00001657.7 tig00001657_g9546.t1 0.9019434478146425 80 Cpa|evm.model.tig00000042.42 tig00000042_g15433.t1 0.8993002921081323 60 Cpa|evm.model.tig00021238.4 Cell cycle.organelle machineries.organelle fission.plastid division.GC1/SulA regulator protein tig00021238_g19543.t1 0.8987451472045274 61 Cpa|evm.model.tig00000219.71 Protein high chlorophyll fluorescent 107 OS=Arabidopsis thaliana tig00000219_g19507.t1 0.8986542890616948 62 Cpa|evm.model.tig00000940.9 tig00000940_g5547.t1 0.8981220553626212 63 Cpa|evm.model.tig00020734.51 15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Capsicum annuum tig00020734_g13603.t1 0.8968945744990224 64 Cpa|evm.model.tig00000157.5 Solute transport.carrier-mediated transport.MC-type solute transporter tig00000157_g9593.t1 0.8962134662591612 65 Cpa|evm.model.tig00020592.4 ABC transporter C family member 1 OS=Arabidopsis thaliana tig00020592_g11633.t1 0.8961680392324013 66 Cpa|evm.model.tig00000478.28 Uncharacterized protein At2g34460, chloroplastic OS=Arabidopsis thaliana tig00000478_g1276.t1 0.8953105329827622 67 Cpa|evm.model.tig00000042.43 Histidine kinase 3 OS=Arabidopsis thaliana tig00000042_g15436.t1 0.8948079719837365 68 Cpa|evm.model.tig00000361.1 tig00000361_g24355.t1 0.8930509011608575 69 Cpa|evm.model.tig00000551.3 tig00000551_g2024.t1 0.8928733357171729 70 Cpa|evm.model.tig00000215.56 Pyridoxal reductase, chloroplastic OS=Arabidopsis thaliana tig00000215_g18594.t1 0.8905159918586948 71 Cpa|evm.model.tig00021035.24 Pentatricopeptide repeat-containing protein At1g63080, mitochondrial OS=Arabidopsis thaliana tig00021035_g17258.t1 0.8904567026152216 87 Cpa|evm.model.tig00001215.19 tig00001215_g7585.t1 0.8884566278364987 73 Cpa|evm.model.tig00000889.39 tig00000889_g5332.t1 0.8867160252588681 74 Cpa|evm.model.tig00000079.6 tig00000079_g2794.t2 0.884845752775754 75 Cpa|evm.model.tig00020952.42 DNA damage response.DNA repair mechanisms.photoreactivation.class II photolyase (PHR1) tig00020952_g16499.t1 0.8847239220311415 76 Cpa|evm.model.tig00021108.36 External alternative NAD(P)H-ubiquinone oxidoreductase B4, mitochondrial OS=Arabidopsis thaliana tig00021108_g18328.t1 0.8845756388723985 77 Cpa|evm.model.tig00020943.73 RNA biosynthesis.transcriptional activation.bHLH transcription factor tig00020943_g16313.t1 0.8844236322922056 78 Cpa|evm.model.tig00001095.9 Prolycopene isomerase, chloroplastic OS=Arabidopsis thaliana tig00001095_g7025.t1 0.8821154452656065 79 Cpa|evm.model.tig00000342.41 tig00000342_g24225.t1 0.8807995825858039 80 Cpa|evm.model.tig00020660.19 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase tig00020660_g12512.t1 0.8798821373991327 82 Cpa|evm.model.tig00001368.15 ABC transporter D family member 2, chloroplastic OS=Arabidopsis thaliana tig00001368_g8414.t1 0.8790221592997174 83 Cpa|evm.model.tig00000553.12 tig00000553_g2082.t1 0.8786339635702115 84 Cpa|evm.model.tig00021582.39 ABC transporter G family member 22 OS=Arabidopsis thaliana tig00021582_g22636.t1 0.8778796957475671 85 Cpa|evm.model.tig00001086.15 tig00001086_g6850.t1 0.8768131082191566 87 Cpa|evm.model.tig00000169.33 tig00000169_g11905.t1 0.8765894836806226 88 Cpa|evm.model.tig00021441.9 tig00021441_g21550.t1 0.8745048243622633 90 Cpa|evm.model.tig00000254.110 tig00000254_g22566.t1 0.8742205873641526 91 Cpa|evm.model.tig00001065.21 tig00001065_g6722.t1 0.872596225731623 92 Cpa|evm.model.tig00020952.27 Deoxyribodipyrimidine photo-lyase OS=Oryza sativa subsp. japonica tig00020952_g16501.t1 0.8721653284078708 93 Cpa|evm.model.tig00000142.17 tig00000142_g8652.t1 0.8714566943065013 95 Cpa|evm.model.tig00000823.29 DCC family protein At1g52590, chloroplastic OS=Arabidopsis thaliana tig00000823_g4555.t1 0.8677807597357926 96 Cpa|evm.model.tig00000796.16 tig00000796_g4238.t1 0.8674190046418891 97 Cpa|evm.model.tig00020830.39 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic OS=Arabidopsis thaliana tig00020830_g14420.t1 0.8669922337319537 98 Cpa|evm.model.tig00021517.27 tig00021517_g22015.t1 0.866631897814398 99 Cpa|evm.model.tig00000607.15 Protein biosynthesis.aminoacyl-tRNA synthetase activities.methionine-tRNA ligase tig00000607_g2526.t1 0.866605464277568 100