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  5. EOD09279

EOD09279


Description : Midasin, AAA lid domain 7; Midasin AAA lid domain 5; ATPase, dynein-related, AAA domain [Interproscan].


Gene families : OG_01_0000696 (OrthoFinder) Phylogenetic Tree(s): OG0000696_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD09279
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000403.82 tig00000403_g342.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 OrthoFinder
Cre03.g161800 30788217 Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 OrthoFinder
Cz01g25050.t1 No alias Midasin, AAA lid domain 7; ATPase, dynein-related, AAA... 0.07 OrthoFinder
OT_01G04150.1 No alias Midasin, AAA lid domain 7; ATPase, dynein-related, AAA... 0.03 OrthoFinder
PTI_00G02450.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_27G01500.1 No alias Midasin, AAA lid domain 7; Midasin AAA lid domain 5;... 0.06 OrthoFinder
Transcript_contig_22575 22575 Hypothetical protein 0.02 OrthoFinder
Transcript_contig_61650 61650 Hypothetical protein 0.02 OrthoFinder
Transcript_contig_65064 65064 Midasin, AAA lid domain 7; ATPase, dynein-related, AAA... 0.01 OrthoFinder
Transcript_contig_78617 78617 Hypothetical protein 0.04 OrthoFinder
Transcript_contig_9424 9424 Hypothetical protein 0.02 OrthoFinder
Vocar.0005s0213.1 32884042 ATPase, dynein-related, AAA domain; Midasin, AAA lid... 0.01 OrthoFinder
lcl|BLLF01000887.1_cds_GFH15700.1_10177 HaLaN_11977, GFH15700 Hypothetical protein 0.02 OrthoFinder
lcl|BLLF01004642.1_cds_GFH30001.1_24478 HaLaN_28767, GFH30001 VWFA domain-containing protein 0.02 OrthoFinder
lcl|LHPG02000014.1_cds_PRW39247.1_2461 PRW39247 Type A von Willebrand factor domain-containing 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Enrichment
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004399 histidinol dehydrogenase activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
BP GO:0030490 maturation of SSU-rRNA IEP Enrichment
MF GO:0030515 snoRNA binding IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
MF GO:0031369 translation initiation factor binding IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR041190 Midasin_AAA_lid_5 514 615
IPR011704 ATPase_dyneun-rel_AAA 416 501
IPR011704 ATPase_dyneun-rel_AAA 119 246
IPR011704 ATPase_dyneun-rel_AAA 685 810
IPR011704 ATPase_dyneun-rel_AAA 1025 1121
IPR011704 ATPase_dyneun-rel_AAA 935 986
IPR011704 ATPase_dyneun-rel_AAA 296 343
IPR011704 ATPase_dyneun-rel_AAA 1249 1387
IPR011704 ATPase_dyneun-rel_AAA 1642 1704
IPR040848 AAA_lid_7 1399 1472
No external refs found!