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Description : Serine proteases, trypsin domain [Interproscan].
Gene families : OG_01_0000055 (OrthoFinder) Phylogenetic Tree(s): OG0000055_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: EOD04314 | |
| Cluster | HCCA: Cluster_74 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| OT_11G02330.1 | No alias | Serine proteases, trypsin domain [Interproscan]. | 0.02 | OrthoFinder | |
| PTI_08G03680.1 | No alias | Serine proteases, trypsin domain [Interproscan]. | 0.02 | OrthoFinder | |
| Sro765_g199150.1 | Contig2703.g21774 | Chymotrypsin-like elastase family member 1 | 0.02 | OrthoFinder | |
| TP08G00330.1 | No alias | Serine proteases, trypsin domain [Interproscan]. | 0.02 | OrthoFinder | |
| Transcript_contig_57460 | 57460 | Serine proteases, trypsin domain [Interproscan]. | 0.01 | OrthoFinder | |
| lcl|VRMN01000020.1_cds_KAA8490681.1_4723 | KAA8490681 | Transmembrane protease serine 9 | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004252 | serine-type endopeptidase activity | IEA | Interproscan |
| BP | GO:0006508 | proteolysis | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Enrichment |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Enrichment |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003743 | translation initiation factor activity | IEP | Enrichment |
| BP | GO:0006397 | mRNA processing | IEP | Enrichment |
| BP | GO:0006413 | translational initiation | IEP | Enrichment |
| BP | GO:0007021 | tubulin complex assembly | IEP | Enrichment |
| BP | GO:0007023 | post-chaperonin tubulin folding pathway | IEP | Enrichment |
| BP | GO:0007034 | vacuolar transport | IEP | Enrichment |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | Enrichment |
| MF | GO:0008270 | zinc ion binding | IEP | Enrichment |
| BP | GO:0008380 | RNA splicing | IEP | Enrichment |
| BP | GO:0016071 | mRNA metabolic process | IEP | Enrichment |
| MF | GO:0016407 | acetyltransferase activity | IEP | Enrichment |
| MF | GO:0016746 | acyltransferase activity | IEP | Enrichment |
| MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | Enrichment |
| CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | Enrichment |
| BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Enrichment |
| MF | GO:0045182 | translation regulator activity | IEP | Enrichment |
| CC | GO:0046540 | U4/U6 x U5 tri-snRNP complex | IEP | Enrichment |
| MF | GO:0046914 | transition metal ion binding | IEP | Enrichment |
| MF | GO:0048487 | beta-tubulin binding | IEP | Enrichment |
| MF | GO:0070008 | serine-type exopeptidase activity | IEP | Enrichment |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | Enrichment |
| CC | GO:0097525 | spliceosomal snRNP complex | IEP | Enrichment |
| CC | GO:0097526 | spliceosomal tri-snRNP complex | IEP | Enrichment |
| CC | GO:0120114 | Sm-like protein family complex | IEP | Enrichment |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001254 | Trypsin_dom | 64 | 292 |
| No external refs found! |