- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : 33188975
Description : Mono-functional DNA-alkylating methyl methanesulfonate N-term [Interproscan].
Gene families : OG_01_0001952 (OrthoFinder) Phylogenetic Tree(s): OG0001952_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dusal.2612s00001.1 | |
| Cluster | HCCA: Cluster_95 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00001024.5 | tig00001024_g6316.t1 | RNA processing.RNA splicing.U2-type-intron-specific... | 0.02 | OrthoFinder | |
| Cpa|evm.model.tig00001024.6 | tig00001024_g6316.t1 | Spliceosome-associated protein 130 A OS=Arabidopsis thaliana | 0.03 | OrthoFinder | |
| Cre08.g372800 | 30773886 | RNA processing.RNA splicing.U2-type-intron-specific... | 0.03 | OrthoFinder | |
| EOD32065 | No alias | Cleavage/polyadenylation specificity factor, A subunit,... | 0.04 | OrthoFinder | |
| OT_06G02080.1 | No alias | Mono-functional DNA-alkylating methyl methanesulfonate... | 0.02 | OrthoFinder | |
| Sro972_g226560.1 | Contig330.g4385 | Spliceosome-associated protein 130 | 0.01 | OrthoFinder | |
| Transcript_contig_57590 | 57590 | Cleavage/polyadenylation specificity factor, A subunit,... | 0.01 | OrthoFinder | |
| Vocar.0065s0010.1 | 32886849 | Cleavage/polyadenylation specificity factor, A subunit,... | 0.02 | OrthoFinder | |
| lcl|BLLF01000402.1_cds_GFH11425.1_5902 | HaLaN_06918, GFH11425 | Spliceosome-associated protein 130 B isoform C | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Enrichment |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Enrichment |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Enrichment |
| CC | GO:0000428 | DNA-directed RNA polymerase complex | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003743 | translation initiation factor activity | IEP | Enrichment |
| MF | GO:0004672 | protein kinase activity | IEP | Enrichment |
| MF | GO:0005049 | nuclear export signal receptor activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005515 | protein binding | IEP | Enrichment |
| MF | GO:0005524 | ATP binding | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005666 | RNA polymerase III complex | IEP | Enrichment |
| CC | GO:0005750 | mitochondrial respiratory chain complex III | IEP | Enrichment |
| CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | Enrichment |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | Enrichment |
| BP | GO:0006122 | mitochondrial electron transport, ubiquinol to cytochrome c | IEP | Enrichment |
| BP | GO:0006383 | transcription by RNA polymerase III | IEP | Enrichment |
| BP | GO:0006397 | mRNA processing | IEP | Enrichment |
| BP | GO:0006468 | protein phosphorylation | IEP | Enrichment |
| MF | GO:0008146 | sulfotransferase activity | IEP | Enrichment |
| BP | GO:0008150 | biological_process | IEP | Enrichment |
| BP | GO:0008380 | RNA splicing | IEP | Enrichment |
| BP | GO:0009060 | aerobic respiration | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| BP | GO:0015980 | energy derivation by oxidation of organic compounds | IEP | Enrichment |
| MF | GO:0016301 | kinase activity | IEP | Enrichment |
| BP | GO:0016310 | phosphorylation | IEP | Enrichment |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Enrichment |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Enrichment |
| MF | GO:0016782 | transferase activity, transferring sulphur-containing groups | IEP | Enrichment |
| MF | GO:0017069 | snRNA binding | IEP | Enrichment |
| MF | GO:0017070 | U6 snRNA binding | IEP | Enrichment |
| MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
| BP | GO:0019646 | aerobic electron transport chain | IEP | Enrichment |
| BP | GO:0022900 | electron transport chain | IEP | Enrichment |
| BP | GO:0022904 | respiratory electron transport chain | IEP | Enrichment |
| BP | GO:0030030 | cell projection organization | IEP | Enrichment |
| BP | GO:0030031 | cell projection assembly | IEP | Enrichment |
| MF | GO:0030247 | polysaccharide binding | IEP | Enrichment |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
| MF | GO:0030623 | U5 snRNA binding | IEP | Enrichment |
| CC | GO:0030880 | RNA polymerase complex | IEP | Enrichment |
| MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
| CC | GO:0032991 | protein-containing complex | IEP | Enrichment |
| CC | GO:0034464 | BBSome | IEP | Enrichment |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
| BP | GO:0044782 | cilium organization | IEP | Enrichment |
| CC | GO:0045275 | respiratory chain complex III | IEP | Enrichment |
| BP | GO:0045333 | cellular respiration | IEP | Enrichment |
| MF | GO:0051920 | peroxiredoxin activity | IEP | Enrichment |
| CC | GO:0055029 | nuclear DNA-directed RNA polymerase complex | IEP | Enrichment |
| BP | GO:0060271 | cilium assembly | IEP | Enrichment |
| CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Enrichment |
| CC | GO:0070069 | cytochrome complex | IEP | Enrichment |
| BP | GO:0070925 | organelle assembly | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
| CC | GO:0098798 | mitochondrial protein-containing complex | IEP | Enrichment |
| CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | Enrichment |
| CC | GO:0098803 | respiratory chain complex | IEP | Enrichment |
| BP | GO:0120031 | plasma membrane bounded cell projection assembly | IEP | Enrichment |
| BP | GO:0120036 | plasma membrane bounded cell projection organization | IEP | Enrichment |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Enrichment |
| MF | GO:0140104 | molecular carrier activity | IEP | Enrichment |
| MF | GO:0140142 | nucleocytoplasmic carrier activity | IEP | Enrichment |
| MF | GO:0140597 | protein carrier activity | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| CC | GO:1902494 | catalytic complex | IEP | Enrichment |
| CC | GO:1990204 | oxidoreductase complex | IEP | Enrichment |
| MF | GO:2001070 | starch binding | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |