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  5. Dusal.1005s00005.1

Dusal.1005s00005.1 (33195266)


Aliases : 33195266

Description : ABC transporter-like; ABC transporter type 1, transmembrane domain [Interproscan].


Gene families : OG_01_0000036 (OrthoFinder) Phylogenetic Tree(s): OG0000036_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.1005s00005.1
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020952.7 tig00020952_g16473.t1 ABC transporter B family member 2 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre16.g692300 30777566 Solute transport.primary active transport.ABC... 0.02 OrthoFinder
EOD22725 No alias Putative ABC transporter [Ensembl]. 0.02 OrthoFinder
PTI_00G03030.1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
Sro157_g071300.1 Contig2362.g19420 Lactococcin transport/processing ATP-binding protein LcnC-like 0.01 OrthoFinder
Sro1769_g296490.1 Contig4211.g32039 Cyclolysin secretion/processing ATP-binding protein CyaB 0.01 OrthoFinder
Sro83_g044320.1 Contig4450.g33406 Lactococcin transport/processing ATP-binding protein LcnC-like 0.01 OrthoFinder
TP03G09080.1 No alias ABC transporter-like; ABC transporter type 1,... 0.02 OrthoFinder
lcl|BLLF01001822.1_cds_GFH21402.1_15879 HaLaN_18703, GFH21402 ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
lcl|BLLF01004805.1_cds_GFH30273.1_24750 HaLaN_29094, GFH30273 ABC transporter-like [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000027.1_cds_KAA8490454.1_2885 KAA8490454 ATP-binding cassette sub-family B member 10, mitochondrial 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 335 451
IPR011527 ABC1_TM_dom 141 247
No external refs found!