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  5. Dusal.0695s00005.1

Dusal.0695s00005.1 (33201554)


Aliases : 33201554

Description : Strawberry notch, helicase C domain; Strawberry notch, AAA domain [Interproscan].


Gene families : OG_01_0000467 (OrthoFinder) Phylogenetic Tree(s): OG0000467_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0695s00005.1
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Cre07.g350100 30774786 Protein FORGETTER 1 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cre13.g578501 30784198 Protein FORGETTER 1 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cz08g14040.t1 No alias Strawberry notch, helicase C domain;... 0.02 OrthoFinder
Cz08g29240.t1 No alias Strawberry notch, AAA domain [Interproscan]. 0.02 OrthoFinder
Dusal.0166s00009.1 33188727 Strawberry notch, AAA domain [Interproscan]. 0.02 OrthoFinder
EOD16011 No alias Strawberry notch, helicase C domain [Interproscan]. 0.03 OrthoFinder
EOD16012 No alias Strawberry notch, AAA domain [Interproscan]. 0.02 OrthoFinder
Sro106_g053630.1 Contig1122.g10760 Strawberry notch homolog 2 0.03 OrthoFinder
TP02G01100.1 No alias Strawberry notch, AAA domain; Strawberry notch, helicase... 0.01 OrthoFinder
Vocar.0001s0130.1 32884628 Strawberry notch, AAA domain; Strawberry notch, helicase... 0.03 OrthoFinder
Vocar.0027s0108.1 32887103 Strawberry notch, AAA domain; Strawberry notch, helicase... 0.02 OrthoFinder
XM_002503038.1 MICPUN_94381, 94381 Strawberry notch, AAA domain; Strawberry notch, helicase... 0.03 OrthoFinder
lcl|BLLF01002831.1_cds_GFH25494.1_19971 HaLaN_23470, GFH25494 Strawberry notch, AAA domain [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58082.1_8009 PRW58082 Strawberry notch-like protein 1-like 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006302 double-strand break repair IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
MF GO:0008146 sulfotransferase activity IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
BP GO:0032012 regulation of ARF protein signal transduction IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
MF GO:0035251 UDP-glucosyltransferase activity IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0046527 glucosyltransferase activity IEP Enrichment
BP GO:0046578 regulation of Ras protein signal transduction IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1902531 regulation of intracellular signal transduction IEP Enrichment
InterPro domains Description Start Stop
IPR039187 SNO_AAA 340 424
IPR039187 SNO_AAA 425 473
IPR039187 SNO_AAA 146 300
IPR026937 SBNO_Helicase_C_dom 1274 1558
No external refs found!