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  5. Dusal.0675s00003.1

Dusal.0675s00003.1 (33202441)


Aliases : 33202441

Description : Archaeal/bacterial/fungal rhodopsins [Interproscan].


Gene families : OG_01_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Dusal.0675s00003.1
Cluster HCCA: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000042.236 tig00000042_g15634.t1 Probable histidine kinase 3 OS=Oryza sativa subsp. indica 0.04 OrthoFinder
Cpa|evm.model.tig00000093.235 tig00000093_g3661.t1 Histidine kinase 3 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00000157.108 tig00000157_g9707.t1 Ethylene receptor 1 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00000640.11 tig00000640_g2766.t1 Probable histidine kinase 4 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder
Cpa|evm.model.tig00001249.15 tig00001249_g7788.t1 Histidine kinase 2 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre07.g329900 30775034 Histidine kinase 5 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre11.g467678 30775629, COP6 Histidine kinase 5 OS=Arabidopsis thaliana 0.03 OrthoFinder
Sro164_g073700.1 Contig4339.g32744 Peroxide stress-activated histidine kinase mak2 0.02 OrthoFinder
Sro20_g014160.1 Contig2954.g23446 Peroxide stress-activated histidine kinase mak2 0.01 OrthoFinder
Sro2374_g325320.1 Contig2298.g19021 Peroxide stress-activated histidine kinase mak2 0.01 OrthoFinder
Sro25_g017380.1 Contig1417.g13077 Virulence factors putative positive transcription regulator BvgA 0.02 OrthoFinder
Sro346_g122750.1 Contig4731.g35102 Hybrid signal transduction histidine kinase J 0.02 OrthoFinder
SymbC1.scaffold733.8 733.8 PAS fold; Histidine kinase/HSP90-like ATPase; Signal... 0.03 OrthoFinder
Vocar.0001s0831.1 32884659 Archaeal/bacterial/fungal rhodopsins; Histidine... 0.02 OrthoFinder
lcl|BLLF01000561.1_cds_GFH12982.1_7459 HaLaN_08776, GFH12982 Signal transduction response regulator, receiver domain... 0.04 OrthoFinder
lcl|BLLF01004756.1_cds_GFH30189.1_24666 HaLaN_28989, GFH30189 Signal transduction histidine kinase,... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001425 Arc/bac/fun_rhodopsins 121 315
No external refs found!