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  5. Dusal.0595s00012.1

Dusal.0595s00012.1 (33191197)


Aliases : 33191197

Description : Vacuolar protein sorting-associated protein 13, N-terminal domain; Vacuolar protein sorting-associated protein 13, second N-terminal domain [Interproscan].


Gene families : OG_01_0000454 (OrthoFinder) Phylogenetic Tree(s): OG0000454_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0595s00012.1
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000042.91 tig00000042_g15491.t1 No description available 0.05 OrthoFinder
Cpa|evm.model.tig00000459.51 tig00000459_g1113.t1 No description available 0.05 OrthoFinder
Cpa|evm.model.tig00000615.84 tig00000615_g2613.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00000849.1 tig00000849_g4739.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00020554.153 tig00020554_g10931.t1 No description available 0.03 OrthoFinder
Cre12.g483500 30792128 No description available 0.04 OrthoFinder
Cre17.g727600 30782771 No description available 0.03 OrthoFinder
Cz02g19210.t1 No alias VPS13, repeated coiled region; Vacuolar protein... 0.04 OrthoFinder
Cz14g16120.t1 No alias Vacuolar protein sorting-associated protein 13,... 0.02 OrthoFinder
Dusal.0511s00002.1 33195055 Vacuolar protein sorting-associated protein 13,... 0.06 OrthoFinder
Transcript_contig_79412 79412 Vacuolar protein sorting-associated protein 13,... 0.02 OrthoFinder
Vocar.0031s0042.1 32890189 VPS13, repeated coiled region; Vacuolar protein... 0.02 OrthoFinder
Vocar.0031s0043.1 32890041 Hypothetical protein 0.02 OrthoFinder
XM_002507017.1 MICPUN_54877, 54877 Vacuolar protein sorting-associated protein 13, second... 0.02 OrthoFinder
lcl|BLLF01000617.1_cds_GFH13477.1_7954 HaLaN_09370, GFH13477 Vacuolar protein sorting-associated protein 13,... 0.02 OrthoFinder
lcl|BLLF01000617.1_cds_GFH13478.1_7955 HaLaN_09371, GFH13478 Hypothetical protein 0.02 OrthoFinder
lcl|LHPG02000012.1_cds_PRW44988.1_1843 PRW44988 Vacuolar sorting-associated 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0003997 acyl-CoA oxidase activity IEP Enrichment
CC GO:0005777 peroxisome IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006635 fatty acid beta-oxidation IEP Enrichment
BP GO:0009062 fatty acid catabolic process IEP Enrichment
BP GO:0016042 lipid catabolic process IEP Enrichment
BP GO:0016054 organic acid catabolic process IEP Enrichment
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016851 magnesium chelatase activity IEP Enrichment
BP GO:0019395 fatty acid oxidation IEP Enrichment
BP GO:0030258 lipid modification IEP Enrichment
BP GO:0034440 lipid oxidation IEP Enrichment
CC GO:0042579 microbody IEP Enrichment
BP GO:0044242 cellular lipid catabolic process IEP Enrichment
BP GO:0044282 small molecule catabolic process IEP Enrichment
BP GO:0046395 carboxylic acid catabolic process IEP Enrichment
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Enrichment
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Enrichment
BP GO:0072329 monocarboxylic acid catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR031646 VPS13_N2 168 421
IPR026854 VPS13-like_N 2 102
No external refs found!