Dusal.0487s00005.1 (33203263)

Aliases : 33203263

Description : Histidine kinase/HSP90-like ATPase; C-terminal associated domain of TOPRIM; DNA topoisomerase, type IIA, subunit B, domain 2; TOPRIM domain; DNA topoisomerase, type IIA, subunit A/C-terminal [Interproscan].

Gene families : OG_01_0001339 (OrthoFinder) Phylogenetic Tree(s): OG0001339_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dusal.0487s00005.1
Cluster	HCCA: Cluster_6

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00021432.55	tig00021432_g21247.t1	DNA topoisomerase 2 OS=Pisum sativum	0.07	OrthoFinder
Cre01.g009250	30789357, TOP2	Cell cycle.interphase.DNA replication.preinitiation.TOP2...	0.08	OrthoFinder
Cz11g19140.t1	No alias	DNA topoisomerase, type IIA, subunit B, domain 2; TOPRIM...	0.05	OrthoFinder
EOD17812	No alias	Putative DNA topoisomerase II [Ensembl].	0.02	OrthoFinder
EOD22469	No alias	DNA topoisomerase, type IIA, subunit A/C-terminal; DNA...	0.05	OrthoFinder
OT_13G00120.1	No alias	TOPRIM domain; DNA topoisomerase, type IIA, subunit B,...	0.05	OrthoFinder
PTI_12G02730.1	No alias	TOPRIM domain; DNA topoisomerase, type IIA, subunit...	0.03	OrthoFinder
Sro150_g068880.1	Contig1519.g13851	DNA topoisomerase 2 top-2	0.03	OrthoFinder
Sro2738_g335950.1	Contig3767.g28935	DNA topoisomerase 2 top-2	0.02	OrthoFinder
SymbC1.scaffold1232.13	1232.13	C-terminal associated domain of TOPRIM; DNA...	0.01	OrthoFinder
TP10G02490.1	No alias	DNA topoisomerase, type IIA, subunit A/C-terminal;...	0.03	OrthoFinder
TP10G02750.1	No alias	DNA topoisomerase, type IIA, subunit A/C-terminal;...	0.01	OrthoFinder
Vocar.0024s0199.1	32890400	Histidine kinase/HSP90-like ATPase; TOPRIM domain; DNA...	0.05	OrthoFinder
XM_002501981.1	MICPUN_58377, 58377	DNA topoisomerase, type IIA, subunit A/C-terminal; DNA...	0.04	OrthoFinder
XM_003057460.1	MicpuC2_46870, 46870	TOPRIM domain; DNA topoisomerase, type IIA, subunit...	0.02	OrthoFinder
lcl\|BLLF01001294.1_cds_GFH18390.1_12867	HaLaN_15188, GFH18390	DNA topoisomerase 2	0.02	OrthoFinder
lcl\|LHPG02000005.1_cds_PRW58281.1_7787	PRW58281	DNA topoisomerase 2	0.02	OrthoFinder
lcl\|VRMN01000001.1_cds_KAA8497819.1_6772	KAA8497819	DNA topoisomerase 2	0.06	OrthoFinder
lcl\|VRMN01000008.1_cds_KAA8492722.1_2458	KAA8492722	DNA topoisomerase 2	0.06	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003916	DNA topoisomerase activity	None	Extended
MF	GO:0003918	DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006265	DNA topological change	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006996	organelle organization	None	Extended
MF	GO:0008094	ATPase, acting on DNA	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016853	isomerase activity	None	Extended
MF	GO:0016887	ATPase	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0051276	chromosome organization	None	Extended
BP	GO:0071103	DNA conformation change	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000776	kinetochore	IEP	Enrichment
MF	GO:0003774	motor activity	IEP	Enrichment
MF	GO:0003777	microtubule motor activity	IEP	Enrichment
MF	GO:0004418	hydroxymethylbilane synthase activity	IEP	Enrichment
MF	GO:0004748	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	IEP	Enrichment
MF	GO:0005515	protein binding	IEP	Enrichment
CC	GO:0005575	cellular_component	IEP	Enrichment
CC	GO:0005694	chromosome	IEP	Enrichment
BP	GO:0006260	DNA replication	IEP	Enrichment
BP	GO:0006270	DNA replication initiation	IEP	Enrichment
BP	GO:0006275	regulation of DNA replication	IEP	Enrichment
BP	GO:0006754	ATP biosynthetic process	IEP	Enrichment
BP	GO:0006928	movement of cell or subcellular component	IEP	Enrichment
BP	GO:0007017	microtubule-based process	IEP	Enrichment
BP	GO:0007018	microtubule-based movement	IEP	Enrichment
MF	GO:0008017	microtubule binding	IEP	Enrichment
MF	GO:0008092	cytoskeletal protein binding	IEP	Enrichment
BP	GO:0008608	attachment of spindle microtubules to kinetochore	IEP	Enrichment
BP	GO:0009058	biosynthetic process	IEP	Enrichment
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	Enrichment
BP	GO:0009142	nucleoside triphosphate biosynthetic process	IEP	Enrichment
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	Enrichment
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	IEP	Enrichment
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	Enrichment
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	IEP	Enrichment
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	Enrichment
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	IEP	Enrichment
BP	GO:0009262	deoxyribonucleotide metabolic process	IEP	Enrichment
BP	GO:0009263	deoxyribonucleotide biosynthetic process	IEP	Enrichment
BP	GO:0010564	regulation of cell cycle process	IEP	Enrichment
BP	GO:0010639	negative regulation of organelle organization	IEP	Enrichment
BP	GO:0010824	regulation of centrosome duplication	IEP	Enrichment
BP	GO:0010826	negative regulation of centrosome duplication	IEP	Enrichment
BP	GO:0010948	negative regulation of cell cycle process	IEP	Enrichment
MF	GO:0015631	tubulin binding	IEP	Enrichment
BP	GO:0015985	energy coupled proton transport, down electrochemical gradient	IEP	Enrichment
BP	GO:0015986	ATP synthesis coupled proton transport	IEP	Enrichment
MF	GO:0016462	pyrophosphatase activity	IEP	Enrichment
MF	GO:0016725	oxidoreductase activity, acting on CH or CH2 groups	IEP	Enrichment
MF	GO:0016728	oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor	IEP	Enrichment
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	Enrichment
MF	GO:0016787	hydrolase activity	IEP	Enrichment
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Enrichment
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Enrichment
MF	GO:0016851	magnesium chelatase activity	IEP	Enrichment
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Enrichment
BP	GO:0018130	heterocycle biosynthetic process	IEP	Enrichment
CC	GO:0018995	host cellular component	IEP	Enrichment
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Enrichment
MF	GO:0019825	oxygen binding	IEP	Enrichment
BP	GO:0022402	cell cycle process	IEP	Enrichment
BP	GO:0030030	cell projection organization	IEP	Enrichment
BP	GO:0030031	cell projection assembly	IEP	Enrichment
CC	GO:0031262	Ndc80 complex	IEP	Enrichment
BP	GO:0032886	regulation of microtubule-based process	IEP	Enrichment
BP	GO:0033043	regulation of organelle organization	IEP	Enrichment
CC	GO:0033643	host cell part	IEP	Enrichment
CC	GO:0033646	host intracellular part	IEP	Enrichment
CC	GO:0033647	host intracellular organelle	IEP	Enrichment
CC	GO:0033648	host intracellular membrane-bounded organelle	IEP	Enrichment
CC	GO:0036038	MKS complex	IEP	Enrichment
CC	GO:0042025	host cell nucleus	IEP	Enrichment
CC	GO:0043226	organelle	IEP	Enrichment
CC	GO:0043229	intracellular organelle	IEP	Enrichment
BP	GO:0044249	cellular biosynthetic process	IEP	Enrichment
BP	GO:0044782	cilium organization	IEP	Enrichment
BP	GO:0045786	negative regulation of cell cycle	IEP	Enrichment
BP	GO:0046605	regulation of centrosome cycle	IEP	Enrichment
BP	GO:0046606	negative regulation of centrosome cycle	IEP	Enrichment
BP	GO:0048519	negative regulation of biological process	IEP	Enrichment
BP	GO:0048523	negative regulation of cellular process	IEP	Enrichment
MF	GO:0051002	ligase activity, forming nitrogen-metal bonds	IEP	Enrichment
MF	GO:0051003	ligase activity, forming nitrogen-metal bonds, forming coordination complexes	IEP	Enrichment
BP	GO:0051128	regulation of cellular component organization	IEP	Enrichment
BP	GO:0051129	negative regulation of cellular component organization	IEP	Enrichment
BP	GO:0051315	attachment of mitotic spindle microtubules to kinetochore	IEP	Enrichment
BP	GO:0051493	regulation of cytoskeleton organization	IEP	Enrichment
BP	GO:0051494	negative regulation of cytoskeleton organization	IEP	Enrichment
BP	GO:0051726	regulation of cell cycle	IEP	Enrichment
BP	GO:0060271	cilium assembly	IEP	Enrichment
MF	GO:0061731	ribonucleoside-diphosphate reductase activity	IEP	Enrichment
BP	GO:0070925	organelle assembly	IEP	Enrichment
CC	GO:0099080	supramolecular complex	IEP	Enrichment
BP	GO:0120031	plasma membrane bounded cell projection assembly	IEP	Enrichment
BP	GO:0120036	plasma membrane bounded cell projection organization	IEP	Enrichment
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	Enrichment
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	Enrichment
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	Enrichment
BP	GO:1901576	organic substance biosynthetic process	IEP	Enrichment
BP	GO:1903047	mitotic cell cycle process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR006171	TOPRIM_domain	462	560
IPR002205	Topo_IIA_A/C	705	1155
IPR013506	Topo_IIA_bsu_dom2	304	430
IPR003594	HATPase_C	87	234
IPR031660	TOPRIM_C	576	702

External Links

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Dusal.0487s00005.1 (33203263)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation