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  5. Dusal.0466s00003.1

Dusal.0466s00003.1 (33194842)


Aliases : 33194842

Description : DEAD/DEAH box helicase domain [Interproscan].


Gene families : OG_01_0000110 (OrthoFinder) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0466s00003.1
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001049.35 tig00001049_g6681.t1 DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa... 0.02 OrthoFinder
Cre01.g021600 30789366 DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre12.g539100 30792646 DEAD-box ATP-dependent RNA helicase 5 OS=Oryza sativa... 0.03 OrthoFinder
Cre12.g540200 30792196 DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa... 0.02 OrthoFinder
EOD38751 No alias Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.01 OrthoFinder
OT_17G02300.1 No alias Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.02 OrthoFinder
Sro1046_g235060.1 Contig1884.g16427 Dependent RNA helicase 0.02 OrthoFinder
Sro1103_g241740.1 Contig4430.g33251 Dependent RNA helicase 0.02 OrthoFinder
Transcript_contig_56606 56606 Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.01 OrthoFinder
Transcript_contig_56629 56629 Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.02 OrthoFinder
Vocar.0007s0049.1 32888024 DEAD/DEAH box helicase domain; Helicase, C-terminal... 0.02 OrthoFinder
XM_002499634.1 MICPUN_67469, 67469 Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.02 OrthoFinder
XM_002502614.1 MICPUN_58886, 58886 DEAD/DEAH box helicase 0.02 OrthoFinder
XM_002504616.1 MICPUN_97883, 97883 Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.02 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59081.1_7009 PRW59081 DEAD-box ATP-dependent RNA helicase 20-like 0.03 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498053.1_7006 KAA8498053 DEAD-box ATP-dependent RNA helicase 5 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005730 nucleolus IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006006 glucose metabolic process IEP Enrichment
BP GO:0006071 glycerol metabolic process IEP Enrichment
BP GO:0006094 gluconeogenesis IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
BP GO:0016051 carbohydrate biosynthetic process IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
MF GO:0019203 carbohydrate phosphatase activity IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
BP GO:0019319 hexose biosynthetic process IEP Enrichment
BP GO:0019400 alditol metabolic process IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
MF GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0046364 monosaccharide biosynthetic process IEP Enrichment
MF GO:0050308 sugar-phosphatase activity IEP Enrichment
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 28 88
IPR011545 DEAD/DEAH_box_helicase_dom 89 177
No external refs found!