Dusal.0432s00003.1 (33197469)

Aliases : 33197469

Description : ABC transporter-like; ABC transporter type 1, transmembrane domain [Interproscan].

Gene families : OG_01_0000039 (OrthoFinder) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dusal.0432s00003.1
Cluster	HCCA: Cluster_81

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00001024.2	tig00001729_g9740.t1	ABC transporter C family member 14 OS=Arabidopsis thaliana	0.02	OrthoFinder
Cpa\|evm.model.tig00001729.6	tig00001729_g9740.t1	Solute transport.primary active transport.ABC...	0.02	OrthoFinder
Cpa\|evm.model.tig00020553.191	tig00020553_g10681.t1	ABC transporter C family member 11 OS=Arabidopsis thaliana	0.02	OrthoFinder
Cpa\|evm.model.tig00020592.4	tig00020592_g11633.t1	ABC transporter C family member 1 OS=Arabidopsis thaliana	0.02	OrthoFinder
EOD12092	No alias	ABC transporter type 1, transmembrane domain; ABC...	0.01	OrthoFinder
Sro1322_g262550.1	Contig3764.g28905	Multiple drug resistance-associated protein-like transporter 1	0.02	OrthoFinder
SymbC1.scaffold2220.1	2220.1	ABC transporter-like; ABC transporter type 1,...	0.01	OrthoFinder
XM_002508173.1	MICPUN_94915, 94915	ATP-binding cassette superfamily	0.03	OrthoFinder
lcl\|LHPG02000009.1_cds_PRW56046.1_9960	PRW56046	Multidrug resistance-associated 1 isoform X1	0.02	OrthoFinder
lcl\|LHPG02000015.1_cds_PRW33949.1_2946	PRW33949	ABC transporter isoform A	0.02	OrthoFinder
lcl\|LHPG02000021.1_cds_PRW20906.1_5063	PRW20906	ABC transporter C family member 13 isoform X1	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0016887	ATPase	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	Enrichment
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	Enrichment
MF	GO:0005047	signal recognition particle binding	IEP	Enrichment
MF	GO:0005048	signal sequence binding	IEP	Enrichment
CC	GO:0005786	signal recognition particle, endoplasmic reticulum targeting	IEP	Enrichment
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Enrichment
BP	GO:0006605	protein targeting	IEP	Enrichment
BP	GO:0006612	protein targeting to membrane	IEP	Enrichment
BP	GO:0006613	cotranslational protein targeting to membrane	IEP	Enrichment
BP	GO:0006614	SRP-dependent cotranslational protein targeting to membrane	IEP	Enrichment
BP	GO:0006621	protein retention in ER lumen	IEP	Enrichment
BP	GO:0006720	isoprenoid metabolic process	IEP	Enrichment
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Enrichment
BP	GO:0006787	porphyrin-containing compound catabolic process	IEP	Enrichment
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEP	Enrichment
MF	GO:0008233	peptidase activity	IEP	Enrichment
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Enrichment
MF	GO:0008312	7S RNA binding	IEP	Enrichment
BP	GO:0015994	chlorophyll metabolic process	IEP	Enrichment
BP	GO:0015996	chlorophyll catabolic process	IEP	Enrichment
MF	GO:0016787	hydrolase activity	IEP	Enrichment
BP	GO:0019439	aromatic compound catabolic process	IEP	Enrichment
MF	GO:0030247	polysaccharide binding	IEP	Enrichment
MF	GO:0030942	endoplasmic reticulum signal peptide binding	IEP	Enrichment
BP	GO:0032507	maintenance of protein location in cell	IEP	Enrichment
BP	GO:0033015	tetrapyrrole catabolic process	IEP	Enrichment
MF	GO:0033218	amide binding	IEP	Enrichment
BP	GO:0033365	protein localization to organelle	IEP	Enrichment
BP	GO:0034613	cellular protein localization	IEP	Enrichment
BP	GO:0035437	maintenance of protein localization in endoplasmic reticulum	IEP	Enrichment
MF	GO:0042277	peptide binding	IEP	Enrichment
BP	GO:0042440	pigment metabolic process	IEP	Enrichment
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEP	Enrichment
MF	GO:0043021	ribonucleoprotein complex binding	IEP	Enrichment
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	Enrichment
MF	GO:0044877	protein-containing complex binding	IEP	Enrichment
BP	GO:0045047	protein targeting to ER	IEP	Enrichment
BP	GO:0045185	maintenance of protein location	IEP	Enrichment
BP	GO:0046149	pigment catabolic process	IEP	Enrichment
BP	GO:0046700	heterocycle catabolic process	IEP	Enrichment
BP	GO:0046907	intracellular transport	IEP	Enrichment
MF	GO:0046923	ER retention sequence binding	IEP	Enrichment
MF	GO:0047746	chlorophyllase activity	IEP	Enrichment
BP	GO:0048193	Golgi vesicle transport	IEP	Enrichment
CC	GO:0048500	signal recognition particle	IEP	Enrichment
BP	GO:0051235	maintenance of location	IEP	Enrichment
BP	GO:0051641	cellular localization	IEP	Enrichment
BP	GO:0051649	establishment of localization in cell	IEP	Enrichment
BP	GO:0051651	maintenance of location in cell	IEP	Enrichment
BP	GO:0051668	localization within membrane	IEP	Enrichment
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Enrichment
MF	GO:0070001	aspartic-type peptidase activity	IEP	Enrichment
BP	GO:0070727	cellular macromolecule localization	IEP	Enrichment
BP	GO:0070972	protein localization to endoplasmic reticulum	IEP	Enrichment
BP	GO:0072594	establishment of protein localization to organelle	IEP	Enrichment
BP	GO:0072595	maintenance of protein localization in organelle	IEP	Enrichment
BP	GO:0072599	establishment of protein localization to endoplasmic reticulum	IEP	Enrichment
BP	GO:0072657	protein localization to membrane	IEP	Enrichment
BP	GO:0090150	establishment of protein localization to membrane	IEP	Enrichment
BP	GO:1901361	organic cyclic compound catabolic process	IEP	Enrichment
BP	GO:1901565	organonitrogen compound catabolic process	IEP	Enrichment
MF	GO:2001070	starch binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	303	449
IPR003439	ABC_transporter-like_ATP-bd	772	870

External Links

No external refs found!

Dusal.0432s00003.1 (33197469)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation