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  5. Dusal.0319s00003.1

Dusal.0319s00003.1 (33201934)


Aliases : 33201934

Description : Archaeal/bacterial/fungal rhodopsins; Histidine kinase/HSP90-like ATPase [Interproscan].


Gene families : OG_01_0000006 (OrthoFinder) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0319s00003.1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000042.236 tig00000042_g15634.t1 Probable histidine kinase 3 OS=Oryza sativa subsp. indica 0.02 OrthoFinder
Cpa|evm.model.tig00000093.235 tig00000093_g3661.t1 Histidine kinase 3 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00000140.15 tig00000140_g8470.t1 Ethylene receptor 1 OS=Cucumis melo var. cantalupensis 0.02 OrthoFinder
Cpa|evm.model.tig00000615.4 tig00000615_g2530.t1 Probable histidine kinase 1 OS=Oryza sativa subsp. indica 0.02 OrthoFinder
Cpa|evm.model.tig00000640.11 tig00000640_g2766.t1 Probable histidine kinase 4 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder
OT_17G01290.1 No alias Archaeal/bacterial/fungal rhodopsins; Histidine... 0.02 OrthoFinder
Sro1556_g282210.1 Contig457.g6172 Hybrid signal transduction histidine kinase J 0.02 OrthoFinder
Sro164_g073700.1 Contig4339.g32744 Peroxide stress-activated histidine kinase mak2 0.01 OrthoFinder
Sro2374_g325320.1 Contig2298.g19021 Peroxide stress-activated histidine kinase mak2 0.03 OrthoFinder
Sro346_g122750.1 Contig4731.g35102 Hybrid signal transduction histidine kinase J 0.01 OrthoFinder
SymbC1.scaffold733.8 733.8 PAS fold; Histidine kinase/HSP90-like ATPase; Signal... 0.02 OrthoFinder
Vocar.0009s0380.1 32893358 Histidine kinase/HSP90-like ATPase; Adenylyl cyclase... 0.03 OrthoFinder
lcl|BLLF01000478.1_cds_GFH12211.1_6688 HaLaN_07851, GFH12211 Signal transduction histidine kinase,... 0.02 OrthoFinder
lcl|BLLF01001142.1_cds_GFH17401.1_11878 HaLaN_14031, GFH17401 Signal transduction response regulator, receiver domain;... 0.04 OrthoFinder
lcl|BLLF01008570.1_cds_GFH33431.1_27908 HaLaN_32803, GFH33431 Chlamyopsin-6 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0007154 cell communication IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
CC GO:0016592 mediator complex IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Enrichment
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001425 Arc/bac/fun_rhodopsins 13 99
IPR003594 HATPase_C 218 282
No external refs found!