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  5. Dusal.0175s00020.1

Dusal.0175s00020.1 (33199713)


Aliases : 33199713

Description : Phenylalanine--tRNA ligase beta subunit, B1 domain; Phenylalanyl tRNA synthetase beta chain, core domain; B3/B4 tRNA-binding domain [Interproscan].


Gene families : OG_01_0003521 (OrthoFinder) Phylogenetic Tree(s): OG0003521_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dusal.0175s00020.1
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021464.35 tig00021464_g21740.t1 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 OrthoFinder
EOD34025 No alias Phenylalanyl tRNA synthetase beta chain, core domain;... 0.01 OrthoFinder
PTI_09G02930.1 No alias Phenylalanyl tRNA synthetase beta chain, core domain;... 0.02 OrthoFinder
Sro299_g111380.1 Contig1218.g11440 Phenylalanine--tRNA ligase beta subunit 0.01 OrthoFinder
Transcript_contig_80536 80536 B3/B4 tRNA-binding domain; Phenylalanine--tRNA ligase... 0.01 OrthoFinder
XM_003064483.1 MicpuC2_45062, 45062 Phenylalanyl tRNA synthetase beta chain, core domain;... 0.02 OrthoFinder
lcl|LHPG02000014.1_cds_PRW39230.1_2539 PRW39230 Putative phenylalanine-tRNA ligase beta subunit 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0004826 phenylalanine-tRNA ligase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP Enrichment
MF GO:0004820 glycine-tRNA ligase activity IEP Enrichment
MF GO:0005261 cation channel activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006405 RNA export from nucleus IEP Enrichment
BP GO:0006406 mRNA export from nucleus IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006426 glycyl-tRNA aminoacylation IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016197 endosomal transport IEP Enrichment
BP GO:0016482 cytosolic transport IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
CC GO:0030906 retromer, cargo-selective complex IEP Enrichment
BP GO:0032012 regulation of ARF protein signal transduction IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0035251 UDP-glucosyltransferase activity IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042147 retrograde transport, endosome to Golgi IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043461 proton-transporting ATP synthase complex assembly IEP Enrichment
BP GO:0043647 inositol phosphate metabolic process IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046164 alcohol catabolic process IEP Enrichment
BP GO:0046174 polyol catabolic process IEP Enrichment
MF GO:0046527 glucosyltransferase activity IEP Enrichment
BP GO:0046578 regulation of Ras protein signal transduction IEP Enrichment
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Enrichment
BP GO:0046855 inositol phosphate dephosphorylation IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0050657 nucleic acid transport IEP Enrichment
BP GO:0050658 RNA transport IEP Enrichment
BP GO:0051028 mRNA transport IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
BP GO:0051168 nuclear export IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051236 establishment of RNA localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0071545 inositol phosphate catabolic process IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901616 organic hydroxy compound catabolic process IEP Enrichment
BP GO:1902531 regulation of intracellular signal transduction IEP Enrichment
InterPro domains Description Start Stop
IPR041616 PheRS_beta_core 370 581
IPR040659 PhetRS_B1 75 168
IPR005146 B3/B4_tRNA-bd 199 327
No external refs found!